Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp7Q8R1T1 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp7Q8R1T1 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp7Q8R1T1 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Chmp7Q8R1T1 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Chmp7Q8R1T1 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Chmp7Q8R1T1 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp7Q8R1T1 Gm5780-201ENSMUST00000217774 1834 ntBASIC15.33■□□□□ 0.05
Chmp7Q8R1T1 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
Chmp7Q8R1T1 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chmp7Q8R1T1 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chmp7Q8R1T1 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chmp7Q8R1T1 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Chmp7Q8R1T1 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Chmp7Q8R1T1 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp7Q8R1T1 Gm43570-201ENSMUST00000199951 3688 ntBASIC15.33■□□□□ 0.04
Chmp7Q8R1T1 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp7Q8R1T1 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp7Q8R1T1 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp7Q8R1T1 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp7Q8R1T1 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp7Q8R1T1 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC15.33■□□□□ 0.04
Chmp7Q8R1T1 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC15.33■□□□□ 0.04
Chmp7Q8R1T1 Gm28324-201ENSMUST00000187913 264 ntBASIC15.33■□□□□ 0.04
Chmp7Q8R1T1 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Chmp7Q8R1T1 Gm43520-201ENSMUST00000197996 164 ntBASIC15.33■□□□□ 0.04
Chmp7Q8R1T1 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp7Q8R1T1 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Chmp7Q8R1T1 Gm44421-201ENSMUST00000205064 1221 ntBASIC15.33■□□□□ 0.04
Chmp7Q8R1T1 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC15.33■□□□□ 0.04
Chmp7Q8R1T1 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp7Q8R1T1 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC15.33■□□□□ 0.04
Chmp7Q8R1T1 Prrxl1-205ENSMUST00000228878 723 ntBASIC15.33■□□□□ 0.04
Chmp7Q8R1T1 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp7Q8R1T1 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Chmp7Q8R1T1 Gm5879-201ENSMUST00000089501 1209 ntBASIC15.33■□□□□ 0.04
Chmp7Q8R1T1 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp7Q8R1T1 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp7Q8R1T1 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp7Q8R1T1 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC15.33■□□□□ 0.04
Chmp7Q8R1T1 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp7Q8R1T1 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Chmp7Q8R1T1 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC15.33■□□□□ 0.04
Chmp7Q8R1T1 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Chmp7Q8R1T1 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp7Q8R1T1 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp7Q8R1T1 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp7Q8R1T1 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC15.32■□□□□ 0.04
Chmp7Q8R1T1 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp7Q8R1T1 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp7Q8R1T1 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp7Q8R1T1 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp7Q8R1T1 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp7Q8R1T1 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp7Q8R1T1 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp7Q8R1T1 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp7Q8R1T1 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp7Q8R1T1 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp7Q8R1T1 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp7Q8R1T1 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp7Q8R1T1 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp7Q8R1T1 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp7Q8R1T1 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC15.32■□□□□ 0.04
Chmp7Q8R1T1 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp7Q8R1T1 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC15.32■□□□□ 0.04
Chmp7Q8R1T1 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp7Q8R1T1 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC15.32■□□□□ 0.04
Chmp7Q8R1T1 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp7Q8R1T1 Gm3150-201ENSMUST00000166418 204 ntBASIC15.32■□□□□ 0.04
Chmp7Q8R1T1 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp7Q8R1T1 Gm25072-201ENSMUST00000175233 235 ntBASIC15.32■□□□□ 0.04
Chmp7Q8R1T1 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Chmp7Q8R1T1 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Chmp7Q8R1T1 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Chmp7Q8R1T1 Mir6958-201ENSMUST00000184207 73 ntBASIC15.32■□□□□ 0.04
Chmp7Q8R1T1 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC15.32■□□□□ 0.04
Chmp7Q8R1T1 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC15.32■□□□□ 0.04
Chmp7Q8R1T1 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp7Q8R1T1 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC15.32■□□□□ 0.04
Chmp7Q8R1T1 Gm13384-201ENSMUST00000117166 1344 ntBASIC15.32■□□□□ 0.04
Chmp7Q8R1T1 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp7Q8R1T1 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp7Q8R1T1 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp7Q8R1T1 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp7Q8R1T1 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Chmp7Q8R1T1 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp7Q8R1T1 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp7Q8R1T1 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Chmp7Q8R1T1 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Chmp7Q8R1T1 AC116503.1-201ENSMUST00000215445 2192 ntBASIC15.31■□□□□ 0.04
Chmp7Q8R1T1 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp7Q8R1T1 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp7Q8R1T1 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp7Q8R1T1 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Chmp7Q8R1T1 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
Chmp7Q8R1T1 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp7Q8R1T1 Gm43852-201ENSMUST00000202098 917 ntBASIC15.31■□□□□ 0.04
Chmp7Q8R1T1 Gm6108-201ENSMUST00000208365 367 ntBASIC15.31■□□□□ 0.04
Chmp7Q8R1T1 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC15.31■□□□□ 0.04
Chmp7Q8R1T1 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms