Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nudcd3Q8R1N4 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nudcd3Q8R1N4 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nudcd3Q8R1N4 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nudcd3Q8R1N4 Gm10268-201ENSMUST00000085340 555 ntBASIC11.99□□□□□ -0.49
Nudcd3Q8R1N4 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nudcd3Q8R1N4 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.99□□□□□ -0.49
Nudcd3Q8R1N4 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nudcd3Q8R1N4 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nudcd3Q8R1N4 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nudcd3Q8R1N4 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nudcd3Q8R1N4 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nudcd3Q8R1N4 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nudcd3Q8R1N4 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nudcd3Q8R1N4 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nudcd3Q8R1N4 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nudcd3Q8R1N4 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nudcd3Q8R1N4 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nudcd3Q8R1N4 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nudcd3Q8R1N4 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Nudcd3Q8R1N4 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nudcd3Q8R1N4 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nudcd3Q8R1N4 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Nudcd3Q8R1N4 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nudcd3Q8R1N4 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nudcd3Q8R1N4 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Nudcd3Q8R1N4 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nudcd3Q8R1N4 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nudcd3Q8R1N4 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.98□□□□□ -0.49
Nudcd3Q8R1N4 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nudcd3Q8R1N4 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Nudcd3Q8R1N4 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nudcd3Q8R1N4 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nudcd3Q8R1N4 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nudcd3Q8R1N4 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nudcd3Q8R1N4 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nudcd3Q8R1N4 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nudcd3Q8R1N4 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Nudcd3Q8R1N4 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.98□□□□□ -0.49
Nudcd3Q8R1N4 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.98□□□□□ -0.49
Nudcd3Q8R1N4 Gm13736-201ENSMUST00000119272 253 ntBASIC11.98□□□□□ -0.49
Nudcd3Q8R1N4 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nudcd3Q8R1N4 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.98□□□□□ -0.49
Nudcd3Q8R1N4 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nudcd3Q8R1N4 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.98□□□□□ -0.49
Nudcd3Q8R1N4 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC11.98□□□□□ -0.49
Nudcd3Q8R1N4 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nudcd3Q8R1N4 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Nudcd3Q8R1N4 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.98□□□□□ -0.49
Nudcd3Q8R1N4 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.98□□□□□ -0.49
Nudcd3Q8R1N4 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nudcd3Q8R1N4 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nudcd3Q8R1N4 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nudcd3Q8R1N4 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nudcd3Q8R1N4 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nudcd3Q8R1N4 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nudcd3Q8R1N4 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Nudcd3Q8R1N4 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nudcd3Q8R1N4 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nudcd3Q8R1N4 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Nudcd3Q8R1N4 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nudcd3Q8R1N4 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nudcd3Q8R1N4 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Nudcd3Q8R1N4 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nudcd3Q8R1N4 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Nudcd3Q8R1N4 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nudcd3Q8R1N4 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nudcd3Q8R1N4 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nudcd3Q8R1N4 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Nudcd3Q8R1N4 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nudcd3Q8R1N4 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nudcd3Q8R1N4 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nudcd3Q8R1N4 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nudcd3Q8R1N4 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Nudcd3Q8R1N4 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.97□□□□□ -0.49
Nudcd3Q8R1N4 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Nudcd3Q8R1N4 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.97□□□□□ -0.49
Nudcd3Q8R1N4 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nudcd3Q8R1N4 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nudcd3Q8R1N4 Gm13342-201ENSMUST00000121055 207 ntBASIC11.97□□□□□ -0.49
Nudcd3Q8R1N4 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.97□□□□□ -0.49
Nudcd3Q8R1N4 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.97□□□□□ -0.49
Nudcd3Q8R1N4 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nudcd3Q8R1N4 Gm9136-201ENSMUST00000193368 454 ntBASIC11.97□□□□□ -0.49
Nudcd3Q8R1N4 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.97□□□□□ -0.49
Nudcd3Q8R1N4 Gm6745-201ENSMUST00000199216 526 ntBASIC11.97□□□□□ -0.49
Nudcd3Q8R1N4 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nudcd3Q8R1N4 Gm18584-201ENSMUST00000203098 964 ntBASIC11.97□□□□□ -0.49
Nudcd3Q8R1N4 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nudcd3Q8R1N4 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.97□□□□□ -0.49
Nudcd3Q8R1N4 Gm39404-201ENSMUST00000216350 313 ntBASIC11.97□□□□□ -0.49
Nudcd3Q8R1N4 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nudcd3Q8R1N4 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.97□□□□□ -0.49
Nudcd3Q8R1N4 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nudcd3Q8R1N4 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nudcd3Q8R1N4 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nudcd3Q8R1N4 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Nudcd3Q8R1N4 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nudcd3Q8R1N4 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Nudcd3Q8R1N4 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms