Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx54Q8K4L0 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx54Q8K4L0 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx54Q8K4L0 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx54Q8K4L0 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ddx54Q8K4L0 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx54Q8K4L0 Gm42863-201ENSMUST00000197875 2958 ntBASIC15.66■□□□□ 0.1
Ddx54Q8K4L0 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx54Q8K4L0 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx54Q8K4L0 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC15.65■□□□□ 0.1
Ddx54Q8K4L0 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx54Q8K4L0 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx54Q8K4L0 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx54Q8K4L0 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx54Q8K4L0 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC15.65■□□□□ 0.1
Ddx54Q8K4L0 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx54Q8K4L0 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx54Q8K4L0 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx54Q8K4L0 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx54Q8K4L0 Gm12791-201ENSMUST00000120788 655 ntBASIC15.65■□□□□ 0.1
Ddx54Q8K4L0 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx54Q8K4L0 Gm25830-201ENSMUST00000158923 132 ntBASIC15.65■□□□□ 0.1
Ddx54Q8K4L0 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx54Q8K4L0 Gm42430-201ENSMUST00000197209 616 ntBASIC15.65■□□□□ 0.1
Ddx54Q8K4L0 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC15.65■□□□□ 0.1
Ddx54Q8K4L0 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC15.65■□□□□ 0.1
Ddx54Q8K4L0 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC15.65■□□□□ 0.1
Ddx54Q8K4L0 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Ddx54Q8K4L0 AC138716.2-201ENSMUST00000226670 1016 ntBASIC15.65■□□□□ 0.1
Ddx54Q8K4L0 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx54Q8K4L0 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Ddx54Q8K4L0 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx54Q8K4L0 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx54Q8K4L0 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx54Q8K4L0 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx54Q8K4L0 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx54Q8K4L0 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx54Q8K4L0 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx54Q8K4L0 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx54Q8K4L0 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx54Q8K4L0 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx54Q8K4L0 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC15.65■□□□□ 0.1
Ddx54Q8K4L0 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx54Q8K4L0 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx54Q8K4L0 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx54Q8K4L0 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx54Q8K4L0 Gm9673-201ENSMUST00000119287 781 ntBASIC15.64■□□□□ 0.09
Ddx54Q8K4L0 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC15.64■□□□□ 0.09
Ddx54Q8K4L0 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx54Q8K4L0 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC15.64■□□□□ 0.09
Ddx54Q8K4L0 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx54Q8K4L0 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx54Q8K4L0 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Ddx54Q8K4L0 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Ddx54Q8K4L0 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC15.64■□□□□ 0.09
Ddx54Q8K4L0 Gm4930-201ENSMUST00000219926 1087 ntBASIC15.64■□□□□ 0.09
Ddx54Q8K4L0 CT010486.3-201ENSMUST00000224555 811 ntBASIC15.64■□□□□ 0.09
Ddx54Q8K4L0 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.64■□□□□ 0.09
Ddx54Q8K4L0 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC15.64■□□□□ 0.09
Ddx54Q8K4L0 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Ddx54Q8K4L0 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx54Q8K4L0 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx54Q8K4L0 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx54Q8K4L0 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx54Q8K4L0 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx54Q8K4L0 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx54Q8K4L0 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx54Q8K4L0 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx54Q8K4L0 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Ddx54Q8K4L0 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx54Q8K4L0 Gm44065-201ENSMUST00000203184 3527 ntBASIC15.63■□□□□ 0.09
Ddx54Q8K4L0 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx54Q8K4L0 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx54Q8K4L0 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx54Q8K4L0 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx54Q8K4L0 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC15.63■□□□□ 0.09
Ddx54Q8K4L0 Gm12906-201ENSMUST00000154610 441 ntBASIC15.63■□□□□ 0.09
Ddx54Q8K4L0 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC15.63■□□□□ 0.09
Ddx54Q8K4L0 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx54Q8K4L0 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC15.63■□□□□ 0.09
Ddx54Q8K4L0 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC15.63■□□□□ 0.09
Ddx54Q8K4L0 Gm9162-201ENSMUST00000182081 991 ntBASIC15.63■□□□□ 0.09
Ddx54Q8K4L0 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC15.63■□□□□ 0.09
Ddx54Q8K4L0 Gm6450-201ENSMUST00000200896 574 ntBASIC15.63■□□□□ 0.09
Ddx54Q8K4L0 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx54Q8K4L0 AC153152.3-201ENSMUST00000222188 1135 ntBASIC15.63■□□□□ 0.09
Ddx54Q8K4L0 AC142266.1-201ENSMUST00000228107 415 ntBASIC15.63■□□□□ 0.09
Ddx54Q8K4L0 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Ddx54Q8K4L0 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx54Q8K4L0 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC15.63■□□□□ 0.09
Ddx54Q8K4L0 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx54Q8K4L0 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx54Q8K4L0 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Ddx54Q8K4L0 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC15.63■□□□□ 0.09
Ddx54Q8K4L0 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC15.63■□□□□ 0.09
Ddx54Q8K4L0 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx54Q8K4L0 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx54Q8K4L0 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx54Q8K4L0 Gm8899-201ENSMUST00000214635 1332 ntBASIC15.63■□□□□ 0.09
Ddx54Q8K4L0 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms