Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rfwd3Q8CIK8 Gm13665-201ENSMUST00000120830 528 ntBASIC11.33□□□□□ -0.6
Rfwd3Q8CIK8 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rfwd3Q8CIK8 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rfwd3Q8CIK8 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.33□□□□□ -0.6
Rfwd3Q8CIK8 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rfwd3Q8CIK8 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Rfwd3Q8CIK8 Gm4034-201ENSMUST00000187674 480 ntBASIC11.33□□□□□ -0.6
Rfwd3Q8CIK8 Rprl1-202ENSMUST00000198476 238 ntBASIC11.33□□□□□ -0.6
Rfwd3Q8CIK8 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.33□□□□□ -0.6
Rfwd3Q8CIK8 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.33□□□□□ -0.6
Rfwd3Q8CIK8 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rfwd3Q8CIK8 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rfwd3Q8CIK8 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rfwd3Q8CIK8 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rfwd3Q8CIK8 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Rfwd3Q8CIK8 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rfwd3Q8CIK8 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Rfwd3Q8CIK8 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.33□□□□□ -0.6
Rfwd3Q8CIK8 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.33□□□□□ -0.6
Rfwd3Q8CIK8 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rfwd3Q8CIK8 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rfwd3Q8CIK8 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rfwd3Q8CIK8 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.33□□□□□ -0.6
Rfwd3Q8CIK8 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.33□□□□□ -0.6
Rfwd3Q8CIK8 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.33□□□□□ -0.6
Rfwd3Q8CIK8 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Rfwd3Q8CIK8 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Rfwd3Q8CIK8 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rfwd3Q8CIK8 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rfwd3Q8CIK8 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rfwd3Q8CIK8 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rfwd3Q8CIK8 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Gm44967-201ENSMUST00000207047 631 ntBASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Gm9257-201ENSMUST00000221254 232 ntBASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Gzmn-202ENSMUST00000225535 989 ntBASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rfwd3Q8CIK8 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Rfwd3Q8CIK8 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rfwd3Q8CIK8 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rfwd3Q8CIK8 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Rfwd3Q8CIK8 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rfwd3Q8CIK8 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Rfwd3Q8CIK8 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.31□□□□□ -0.6
Rfwd3Q8CIK8 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Rfwd3Q8CIK8 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.31□□□□□ -0.6
Rfwd3Q8CIK8 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rfwd3Q8CIK8 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rfwd3Q8CIK8 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rfwd3Q8CIK8 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rfwd3Q8CIK8 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Rfwd3Q8CIK8 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rfwd3Q8CIK8 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Rfwd3Q8CIK8 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms