Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Syne4Q8CII8 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Syne4Q8CII8 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Syne4Q8CII8 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Syne4Q8CII8 Gm9089-201ENSMUST00000122027 526 ntBASIC13.55□□□□□ -0.24
Syne4Q8CII8 Gm9135-201ENSMUST00000182963 990 ntBASIC13.55□□□□□ -0.24
Syne4Q8CII8 Gm9136-201ENSMUST00000193368 454 ntBASIC13.55□□□□□ -0.24
Syne4Q8CII8 Gm43778-201ENSMUST00000199438 199 ntBASIC13.55□□□□□ -0.24
Syne4Q8CII8 Gm18463-201ENSMUST00000207258 474 ntBASIC13.55□□□□□ -0.24
Syne4Q8CII8 Gm45758-201ENSMUST00000212448 1006 ntBASIC13.55□□□□□ -0.24
Syne4Q8CII8 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.55□□□□□ -0.24
Syne4Q8CII8 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Syne4Q8CII8 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Syne4Q8CII8 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Syne4Q8CII8 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Syne4Q8CII8 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.55□□□□□ -0.24
Syne4Q8CII8 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Syne4Q8CII8 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Syne4Q8CII8 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Syne4Q8CII8 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Syne4Q8CII8 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.55□□□□□ -0.24
Syne4Q8CII8 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Syne4Q8CII8 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Syne4Q8CII8 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Syne4Q8CII8 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Syne4Q8CII8 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Syne4Q8CII8 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.55□□□□□ -0.24
Syne4Q8CII8 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Syne4Q8CII8 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Syne4Q8CII8 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Syne4Q8CII8 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Syne4Q8CII8 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Syne4Q8CII8 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Syne4Q8CII8 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Syne4Q8CII8 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Syne4Q8CII8 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Syne4Q8CII8 Gm8038-201ENSMUST00000164674 2044 ntBASIC13.54□□□□□ -0.24
Syne4Q8CII8 Gm6189-201ENSMUST00000164487 2082 ntBASIC13.54□□□□□ -0.24
Syne4Q8CII8 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Syne4Q8CII8 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Syne4Q8CII8 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.54□□□□□ -0.24
Syne4Q8CII8 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Syne4Q8CII8 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Syne4Q8CII8 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Syne4Q8CII8 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Syne4Q8CII8 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Syne4Q8CII8 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Syne4Q8CII8 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Syne4Q8CII8 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Syne4Q8CII8 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Syne4Q8CII8 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC13.54□□□□□ -0.24
Syne4Q8CII8 Gm13549-201ENSMUST00000118339 796 ntBASIC13.54□□□□□ -0.24
Syne4Q8CII8 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC13.54□□□□□ -0.24
Syne4Q8CII8 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Syne4Q8CII8 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Syne4Q8CII8 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.54□□□□□ -0.24
Syne4Q8CII8 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC13.54□□□□□ -0.24
Syne4Q8CII8 Gm9630-201ENSMUST00000178304 885 ntBASIC13.54□□□□□ -0.24
Syne4Q8CII8 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Syne4Q8CII8 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Syne4Q8CII8 Gm7959-201ENSMUST00000221823 1078 ntBASIC13.54□□□□□ -0.24
Syne4Q8CII8 AC126799.1-201ENSMUST00000221976 246 ntBASIC13.54□□□□□ -0.24
Syne4Q8CII8 AC129308.3-201ENSMUST00000225652 524 ntBASIC13.54□□□□□ -0.24
Syne4Q8CII8 Gm4604-201ENSMUST00000025040 390 ntBASIC13.54□□□□□ -0.24
Syne4Q8CII8 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Syne4Q8CII8 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Syne4Q8CII8 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Syne4Q8CII8 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Syne4Q8CII8 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Syne4Q8CII8 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Syne4Q8CII8 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Syne4Q8CII8 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Syne4Q8CII8 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Syne4Q8CII8 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Syne4Q8CII8 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Syne4Q8CII8 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Syne4Q8CII8 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Syne4Q8CII8 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Syne4Q8CII8 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Syne4Q8CII8 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Syne4Q8CII8 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Syne4Q8CII8 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Syne4Q8CII8 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Syne4Q8CII8 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Syne4Q8CII8 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Syne4Q8CII8 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Syne4Q8CII8 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Syne4Q8CII8 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Syne4Q8CII8 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Syne4Q8CII8 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Syne4Q8CII8 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC13.53□□□□□ -0.24
Syne4Q8CII8 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Syne4Q8CII8 Gm15615-201ENSMUST00000118876 198 ntBASIC13.53□□□□□ -0.24
Syne4Q8CII8 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC13.53□□□□□ -0.24
Syne4Q8CII8 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Syne4Q8CII8 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Syne4Q8CII8 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Syne4Q8CII8 Gm7902-201ENSMUST00000198842 947 ntBASIC13.53□□□□□ -0.24
Syne4Q8CII8 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC13.53□□□□□ -0.24
Syne4Q8CII8 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms