Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vcpip1Q8CDG3 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vcpip1Q8CDG3 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vcpip1Q8CDG3 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vcpip1Q8CDG3 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Vcpip1Q8CDG3 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vcpip1Q8CDG3 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vcpip1Q8CDG3 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.92□□□□□ -0.34
Vcpip1Q8CDG3 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.92□□□□□ -0.34
Vcpip1Q8CDG3 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vcpip1Q8CDG3 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vcpip1Q8CDG3 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vcpip1Q8CDG3 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Vcpip1Q8CDG3 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vcpip1Q8CDG3 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Vcpip1Q8CDG3 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Vcpip1Q8CDG3 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.92□□□□□ -0.34
Vcpip1Q8CDG3 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Vcpip1Q8CDG3 Gm13786-201ENSMUST00000122371 333 ntBASIC12.92□□□□□ -0.34
Vcpip1Q8CDG3 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vcpip1Q8CDG3 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.92□□□□□ -0.34
Vcpip1Q8CDG3 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.92□□□□□ -0.34
Vcpip1Q8CDG3 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.92□□□□□ -0.34
Vcpip1Q8CDG3 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vcpip1Q8CDG3 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.92□□□□□ -0.34
Vcpip1Q8CDG3 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vcpip1Q8CDG3 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vcpip1Q8CDG3 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vcpip1Q8CDG3 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vcpip1Q8CDG3 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vcpip1Q8CDG3 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vcpip1Q8CDG3 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vcpip1Q8CDG3 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Vcpip1Q8CDG3 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vcpip1Q8CDG3 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vcpip1Q8CDG3 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vcpip1Q8CDG3 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vcpip1Q8CDG3 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vcpip1Q8CDG3 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vcpip1Q8CDG3 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vcpip1Q8CDG3 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Vcpip1Q8CDG3 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Gm14381-201ENSMUST00000122105 414 ntBASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Mir7070-201ENSMUST00000183657 86 ntBASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Gm37259-201ENSMUST00000193903 849 ntBASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Gm7046-201ENSMUST00000221351 977 ntBASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Vcpip1Q8CDG3 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vcpip1Q8CDG3 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vcpip1Q8CDG3 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vcpip1Q8CDG3 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vcpip1Q8CDG3 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms