Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC14.02□□□□□ -0.17
Vps53Q8CCB4 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps53Q8CCB4 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Vps53Q8CCB4 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vps53Q8CCB4 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps53Q8CCB4 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps53Q8CCB4 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vps53Q8CCB4 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps53Q8CCB4 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vps53Q8CCB4 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps53Q8CCB4 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps53Q8CCB4 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Vps53Q8CCB4 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps53Q8CCB4 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vps53Q8CCB4 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps53Q8CCB4 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vps53Q8CCB4 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps53Q8CCB4 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps53Q8CCB4 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Vps53Q8CCB4 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Vps53Q8CCB4 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vps53Q8CCB4 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC14.01□□□□□ -0.17
Vps53Q8CCB4 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Vps53Q8CCB4 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC14.01□□□□□ -0.17
Vps53Q8CCB4 Gm42599-201ENSMUST00000201308 469 ntBASIC14.01□□□□□ -0.17
Vps53Q8CCB4 Gm44882-201ENSMUST00000205702 802 ntBASIC14.01□□□□□ -0.17
Vps53Q8CCB4 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC14.01□□□□□ -0.17
Vps53Q8CCB4 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Vps53Q8CCB4 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps53Q8CCB4 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC14.01□□□□□ -0.17
Vps53Q8CCB4 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps53Q8CCB4 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps53Q8CCB4 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Vps53Q8CCB4 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps53Q8CCB4 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Vps53Q8CCB4 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Vps53Q8CCB4 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps53Q8CCB4 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC14.01□□□□□ -0.17
Vps53Q8CCB4 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps53Q8CCB4 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps53Q8CCB4 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps53Q8CCB4 Gm44831-201ENSMUST00000208469 2989 ntBASIC14.01□□□□□ -0.17
Vps53Q8CCB4 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Vps53Q8CCB4 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps53Q8CCB4 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps53Q8CCB4 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Vps53Q8CCB4 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vps53Q8CCB4 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Vps53Q8CCB4 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Vps53Q8CCB4 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps53Q8CCB4 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Vps53Q8CCB4 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps53Q8CCB4 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC14□□□□□ -0.17
Vps53Q8CCB4 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps53Q8CCB4 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vps53Q8CCB4 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
Vps53Q8CCB4 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Vps53Q8CCB4 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vps53Q8CCB4 Rprl1-202ENSMUST00000198476 238 ntBASIC14□□□□□ -0.17
Vps53Q8CCB4 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC14□□□□□ -0.17
Vps53Q8CCB4 Gm45433-201ENSMUST00000209386 247 ntBASIC14□□□□□ -0.17
Vps53Q8CCB4 Gm8913-201ENSMUST00000209491 641 ntBASIC14□□□□□ -0.17
Vps53Q8CCB4 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vps53Q8CCB4 CT009718.3-201ENSMUST00000221116 367 ntBASIC14□□□□□ -0.17
Vps53Q8CCB4 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Vps53Q8CCB4 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Vps53Q8CCB4 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps53Q8CCB4 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Vps53Q8CCB4 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps53Q8CCB4 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vps53Q8CCB4 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Vps53Q8CCB4 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC14□□□□□ -0.17
Vps53Q8CCB4 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps53Q8CCB4 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Vps53Q8CCB4 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps53Q8CCB4 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps53Q8CCB4 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps53Q8CCB4 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps53Q8CCB4 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps53Q8CCB4 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps53Q8CCB4 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps53Q8CCB4 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps53Q8CCB4 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps53Q8CCB4 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.99□□□□□ -0.17
Vps53Q8CCB4 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vps53Q8CCB4 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
Vps53Q8CCB4 Gm14132-201ENSMUST00000117188 1719 ntBASIC13.99□□□□□ -0.17
Vps53Q8CCB4 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vps53Q8CCB4 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps53Q8CCB4 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps53Q8CCB4 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC13.99□□□□□ -0.17
Vps53Q8CCB4 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps53Q8CCB4 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps53Q8CCB4 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps53Q8CCB4 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Vps53Q8CCB4 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vps53Q8CCB4 Gm6211-201ENSMUST00000147973 4275 ntBASIC13.99□□□□□ -0.17
Vps53Q8CCB4 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps53Q8CCB4 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps53Q8CCB4 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms