Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gm37287-201ENSMUST00000195449 695 ntBASIC13.98□□□□□ -0.17
Alx1Q8C8B0 Gm37793-201ENSMUST00000195548 695 ntBASIC13.98□□□□□ -0.17
Alx1Q8C8B0 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Alx1Q8C8B0 CT009713.8-201ENSMUST00000225448 560 ntBASIC13.98□□□□□ -0.17
Alx1Q8C8B0 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Alx1Q8C8B0 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Alx1Q8C8B0 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Alx1Q8C8B0 Gm10288-201ENSMUST00000084614 537 ntBASIC13.98□□□□□ -0.17
Alx1Q8C8B0 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Alx1Q8C8B0 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Alx1Q8C8B0 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Alx1Q8C8B0 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
Alx1Q8C8B0 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Alx1Q8C8B0 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Alx1Q8C8B0 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Alx1Q8C8B0 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Alx1Q8C8B0 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Alx1Q8C8B0 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Alx1Q8C8B0 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Alx1Q8C8B0 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Alx1Q8C8B0 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Alx1Q8C8B0 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Alx1Q8C8B0 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Alx1Q8C8B0 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Alx1Q8C8B0 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Alx1Q8C8B0 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Alx1Q8C8B0 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Alx1Q8C8B0 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Alx1Q8C8B0 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Alx1Q8C8B0 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Alx1Q8C8B0 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Alx1Q8C8B0 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Alx1Q8C8B0 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Alx1Q8C8B0 Gm13461-201ENSMUST00000120980 662 ntBASIC13.97□□□□□ -0.17
Alx1Q8C8B0 Gm11960-201ENSMUST00000122068 925 ntBASIC13.97□□□□□ -0.17
Alx1Q8C8B0 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Alx1Q8C8B0 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Alx1Q8C8B0 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Alx1Q8C8B0 Rn7s1-201ENSMUST00000174924 300 ntBASIC13.97□□□□□ -0.17
Alx1Q8C8B0 Rn7s2-201ENSMUST00000175032 300 ntBASIC13.97□□□□□ -0.17
Alx1Q8C8B0 Gm26461-201ENSMUST00000175064 290 ntBASIC13.97□□□□□ -0.17
Alx1Q8C8B0 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC13.97□□□□□ -0.17
Alx1Q8C8B0 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC13.97□□□□□ -0.17
Alx1Q8C8B0 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC13.97□□□□□ -0.17
Alx1Q8C8B0 Gm44136-201ENSMUST00000203819 1106 ntBASIC13.97□□□□□ -0.17
Alx1Q8C8B0 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Alx1Q8C8B0 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Alx1Q8C8B0 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC13.97□□□□□ -0.17
Alx1Q8C8B0 AC155637.1-201ENSMUST00000218560 636 ntBASIC13.97□□□□□ -0.17
Alx1Q8C8B0 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Alx1Q8C8B0 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Alx1Q8C8B0 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Alx1Q8C8B0 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.97□□□□□ -0.17
Alx1Q8C8B0 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Alx1Q8C8B0 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Alx1Q8C8B0 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Alx1Q8C8B0 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Alx1Q8C8B0 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Alx1Q8C8B0 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Alx1Q8C8B0 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Alx1Q8C8B0 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Alx1Q8C8B0 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Alx1Q8C8B0 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Alx1Q8C8B0 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Alx1Q8C8B0 Gm13347-201ENSMUST00000120298 1353 ntBASIC13.96□□□□□ -0.17
Alx1Q8C8B0 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Alx1Q8C8B0 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Alx1Q8C8B0 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Alx1Q8C8B0 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Alx1Q8C8B0 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Alx1Q8C8B0 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Alx1Q8C8B0 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Alx1Q8C8B0 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Alx1Q8C8B0 Gm43172-201ENSMUST00000202139 2137 ntBASIC13.96□□□□□ -0.17
Alx1Q8C8B0 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.96□□□□□ -0.17
Alx1Q8C8B0 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.96□□□□□ -0.17
Alx1Q8C8B0 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Alx1Q8C8B0 Gm42913-201ENSMUST00000197936 1853 ntBASIC13.96□□□□□ -0.17
Alx1Q8C8B0 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Alx1Q8C8B0 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Alx1Q8C8B0 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Alx1Q8C8B0 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC13.96□□□□□ -0.17
Alx1Q8C8B0 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Alx1Q8C8B0 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC13.96□□□□□ -0.17
Alx1Q8C8B0 Gm5982-201ENSMUST00000196234 512 ntBASIC13.96□□□□□ -0.17
Alx1Q8C8B0 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC13.96□□□□□ -0.17
Alx1Q8C8B0 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Alx1Q8C8B0 Gm7940-201ENSMUST00000218195 769 ntBASIC13.96□□□□□ -0.17
Alx1Q8C8B0 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Alx1Q8C8B0 Gm5537-201ENSMUST00000091117 1252 ntBASIC13.96□□□□□ -0.17
Alx1Q8C8B0 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Alx1Q8C8B0 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Alx1Q8C8B0 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Alx1Q8C8B0 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Alx1Q8C8B0 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Alx1Q8C8B0 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Alx1Q8C8B0 Gm43242-201ENSMUST00000199507 1776 ntBASIC13.96□□□□□ -0.18
Alx1Q8C8B0 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.96□□□□□ -0.18
Alx1Q8C8B0 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Alx1Q8C8B0 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC13.96□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms