Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Aph1bQ8C7N7 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Aph1bQ8C7N7 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Aph1bQ8C7N7 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.85□□□□□ -0.51
Aph1bQ8C7N7 Gm13297-201ENSMUST00000120205 934 ntBASIC11.85□□□□□ -0.51
Aph1bQ8C7N7 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Aph1bQ8C7N7 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Aph1bQ8C7N7 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Aph1bQ8C7N7 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Aph1bQ8C7N7 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.85□□□□□ -0.51
Aph1bQ8C7N7 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Aph1bQ8C7N7 Olfr284-202ENSMUST00000206647 966 ntBASIC11.85□□□□□ -0.51
Aph1bQ8C7N7 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Aph1bQ8C7N7 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.85□□□□□ -0.51
Aph1bQ8C7N7 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.85□□□□□ -0.51
Aph1bQ8C7N7 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.85□□□□□ -0.51
Aph1bQ8C7N7 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Aph1bQ8C7N7 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Aph1bQ8C7N7 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Aph1bQ8C7N7 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Aph1bQ8C7N7 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Aph1bQ8C7N7 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Aph1bQ8C7N7 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Aph1bQ8C7N7 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.85□□□□□ -0.51
Aph1bQ8C7N7 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Aph1bQ8C7N7 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Aph1bQ8C7N7 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Aph1bQ8C7N7 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Aph1bQ8C7N7 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Aph1bQ8C7N7 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Aph1bQ8C7N7 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Aph1bQ8C7N7 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Aph1bQ8C7N7 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Aph1bQ8C7N7 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Aph1bQ8C7N7 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.84□□□□□ -0.51
Aph1bQ8C7N7 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Aph1bQ8C7N7 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Aph1bQ8C7N7 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Aph1bQ8C7N7 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Aph1bQ8C7N7 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Aph1bQ8C7N7 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Aph1bQ8C7N7 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Aph1bQ8C7N7 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Aph1bQ8C7N7 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Aph1bQ8C7N7 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Aph1bQ8C7N7 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Aph1bQ8C7N7 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.84□□□□□ -0.51
Aph1bQ8C7N7 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Aph1bQ8C7N7 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Aph1bQ8C7N7 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Aph1bQ8C7N7 Gm9192-201ENSMUST00000183221 985 ntBASIC11.84□□□□□ -0.51
Aph1bQ8C7N7 Gm29396-201ENSMUST00000185659 716 ntBASIC11.84□□□□□ -0.51
Aph1bQ8C7N7 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.84□□□□□ -0.51
Aph1bQ8C7N7 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.84□□□□□ -0.51
Aph1bQ8C7N7 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.84□□□□□ -0.51
Aph1bQ8C7N7 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.84□□□□□ -0.51
Aph1bQ8C7N7 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Aph1bQ8C7N7 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Aph1bQ8C7N7 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Aph1bQ8C7N7 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Aph1bQ8C7N7 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Aph1bQ8C7N7 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.84□□□□□ -0.51
Aph1bQ8C7N7 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Aph1bQ8C7N7 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Aph1bQ8C7N7 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Aph1bQ8C7N7 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Aph1bQ8C7N7 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Aph1bQ8C7N7 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Aph1bQ8C7N7 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.84□□□□□ -0.51
Aph1bQ8C7N7 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Aph1bQ8C7N7 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Aph1bQ8C7N7 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Aph1bQ8C7N7 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Aph1bQ8C7N7 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.51
Aph1bQ8C7N7 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Aph1bQ8C7N7 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Aph1bQ8C7N7 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Aph1bQ8C7N7 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Aph1bQ8C7N7 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Aph1bQ8C7N7 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Aph1bQ8C7N7 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Aph1bQ8C7N7 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Aph1bQ8C7N7 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Aph1bQ8C7N7 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.83□□□□□ -0.52
Aph1bQ8C7N7 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Aph1bQ8C7N7 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.83□□□□□ -0.52
Aph1bQ8C7N7 Gm12015-201ENSMUST00000117065 843 ntBASIC11.83□□□□□ -0.52
Aph1bQ8C7N7 Gm15370-201ENSMUST00000117158 253 ntBASIC11.83□□□□□ -0.52
Aph1bQ8C7N7 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Aph1bQ8C7N7 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Aph1bQ8C7N7 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.83□□□□□ -0.52
Aph1bQ8C7N7 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Aph1bQ8C7N7 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Aph1bQ8C7N7 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Aph1bQ8C7N7 Gm10608-202ENSMUST00000213924 676 ntBASIC11.83□□□□□ -0.52
Aph1bQ8C7N7 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Aph1bQ8C7N7 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Aph1bQ8C7N7 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Aph1bQ8C7N7 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Aph1bQ8C7N7 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms