Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim9Q8C7M3 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.24□□□□□ -0.29
Trim9Q8C7M3 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim9Q8C7M3 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim9Q8C7M3 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trim9Q8C7M3 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim9Q8C7M3 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim9Q8C7M3 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim9Q8C7M3 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim9Q8C7M3 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim9Q8C7M3 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC13.23□□□□□ -0.29
Trim9Q8C7M3 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC13.23□□□□□ -0.29
Trim9Q8C7M3 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trim9Q8C7M3 Gm37542-201ENSMUST00000192563 2832 ntBASIC13.23□□□□□ -0.29
Trim9Q8C7M3 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim9Q8C7M3 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim9Q8C7M3 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trim9Q8C7M3 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim9Q8C7M3 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC13.23□□□□□ -0.29
Trim9Q8C7M3 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Trim9Q8C7M3 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.23□□□□□ -0.29
Trim9Q8C7M3 Gm13665-201ENSMUST00000120830 528 ntBASIC13.23□□□□□ -0.29
Trim9Q8C7M3 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim9Q8C7M3 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Trim9Q8C7M3 Gm27320-201ENSMUST00000184892 109 ntBASIC13.23□□□□□ -0.29
Trim9Q8C7M3 Ighv5-7-201ENSMUST00000192302 244 ntBASIC13.23□□□□□ -0.29
Trim9Q8C7M3 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.23□□□□□ -0.29
Trim9Q8C7M3 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC13.23□□□□□ -0.29
Trim9Q8C7M3 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim9Q8C7M3 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim9Q8C7M3 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim9Q8C7M3 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trim9Q8C7M3 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim9Q8C7M3 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim9Q8C7M3 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim9Q8C7M3 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Trim9Q8C7M3 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim9Q8C7M3 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim9Q8C7M3 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim9Q8C7M3 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim9Q8C7M3 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim9Q8C7M3 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim9Q8C7M3 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim9Q8C7M3 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trim9Q8C7M3 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim9Q8C7M3 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC13.23□□□□□ -0.29
Trim9Q8C7M3 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim9Q8C7M3 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim9Q8C7M3 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim9Q8C7M3 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim9Q8C7M3 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trim9Q8C7M3 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC13.22□□□□□ -0.29
Trim9Q8C7M3 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.22□□□□□ -0.29
Trim9Q8C7M3 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim9Q8C7M3 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim9Q8C7M3 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim9Q8C7M3 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim9Q8C7M3 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim9Q8C7M3 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim9Q8C7M3 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim9Q8C7M3 Gm26286-201ENSMUST00000104166 134 ntBASIC13.22□□□□□ -0.29
Trim9Q8C7M3 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trim9Q8C7M3 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim9Q8C7M3 Gm25890-201ENSMUST00000177643 165 ntBASIC13.22□□□□□ -0.29
Trim9Q8C7M3 Rnu1b2-201ENSMUST00000178073 165 ntBASIC13.22□□□□□ -0.29
Trim9Q8C7M3 Rnu1b1-201ENSMUST00000178250 165 ntBASIC13.22□□□□□ -0.29
Trim9Q8C7M3 Gm22614-201ENSMUST00000178300 165 ntBASIC13.22□□□□□ -0.29
Trim9Q8C7M3 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim9Q8C7M3 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC13.22□□□□□ -0.29
Trim9Q8C7M3 Aprt-ps-201ENSMUST00000212311 505 ntBASIC13.22□□□□□ -0.29
Trim9Q8C7M3 Gm7172-201ENSMUST00000218047 1152 ntBASIC13.22□□□□□ -0.29
Trim9Q8C7M3 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim9Q8C7M3 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC13.22□□□□□ -0.29
Trim9Q8C7M3 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim9Q8C7M3 Gm22042-201ENSMUST00000082989 165 ntBASIC13.22□□□□□ -0.29
Trim9Q8C7M3 Gm26110-201ENSMUST00000083971 165 ntBASIC13.22□□□□□ -0.29
Trim9Q8C7M3 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC13.22□□□□□ -0.29
Trim9Q8C7M3 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim9Q8C7M3 AC154639.1-201ENSMUST00000224393 2849 ntBASIC13.22□□□□□ -0.29
Trim9Q8C7M3 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim9Q8C7M3 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim9Q8C7M3 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim9Q8C7M3 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.22□□□□□ -0.29
Trim9Q8C7M3 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim9Q8C7M3 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim9Q8C7M3 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim9Q8C7M3 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim9Q8C7M3 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim9Q8C7M3 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim9Q8C7M3 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim9Q8C7M3 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Trim9Q8C7M3 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim9Q8C7M3 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim9Q8C7M3 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim9Q8C7M3 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.21□□□□□ -0.29
Trim9Q8C7M3 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim9Q8C7M3 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim9Q8C7M3 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim9Q8C7M3 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trim9Q8C7M3 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms