Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Ska3Q8C263 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ska3Q8C263 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.34□□□□□ -0.59
Ska3Q8C263 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.34□□□□□ -0.59
Ska3Q8C263 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ska3Q8C263 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Ska3Q8C263 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ska3Q8C263 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ska3Q8C263 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.34□□□□□ -0.59
Ska3Q8C263 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ska3Q8C263 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ska3Q8C263 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Ska3Q8C263 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ska3Q8C263 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
Ska3Q8C263 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ska3Q8C263 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.34□□□□□ -0.59
Ska3Q8C263 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.34□□□□□ -0.59
Ska3Q8C263 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ska3Q8C263 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.34□□□□□ -0.59
Ska3Q8C263 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ska3Q8C263 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska3Q8C263 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.33□□□□□ -0.6
Ska3Q8C263 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska3Q8C263 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ska3Q8C263 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska3Q8C263 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska3Q8C263 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska3Q8C263 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska3Q8C263 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Ska3Q8C263 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ska3Q8C263 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska3Q8C263 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska3Q8C263 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska3Q8C263 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ska3Q8C263 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska3Q8C263 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.33□□□□□ -0.6
Ska3Q8C263 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ska3Q8C263 Gm26361-201ENSMUST00000158868 186 ntBASIC11.33□□□□□ -0.6
Ska3Q8C263 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.33□□□□□ -0.6
Ska3Q8C263 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.33□□□□□ -0.6
Ska3Q8C263 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska3Q8C263 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.33□□□□□ -0.6
Ska3Q8C263 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska3Q8C263 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Ska3Q8C263 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska3Q8C263 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ska3Q8C263 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Ska3Q8C263 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska3Q8C263 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska3Q8C263 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska3Q8C263 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska3Q8C263 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska3Q8C263 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska3Q8C263 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ska3Q8C263 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Ska3Q8C263 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska3Q8C263 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Ska3Q8C263 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ska3Q8C263 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska3Q8C263 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska3Q8C263 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Ska3Q8C263 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska3Q8C263 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska3Q8C263 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska3Q8C263 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ska3Q8C263 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.32□□□□□ -0.6
Ska3Q8C263 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Ska3Q8C263 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.32□□□□□ -0.6
Ska3Q8C263 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ska3Q8C263 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Ska3Q8C263 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ska3Q8C263 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ska3Q8C263 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.32□□□□□ -0.6
Ska3Q8C263 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ska3Q8C263 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ska3Q8C263 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ska3Q8C263 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Ska3Q8C263 Cog3-203ENSMUST00000227473 4197 ntBASIC11.32□□□□□ -0.6
Ska3Q8C263 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.32□□□□□ -0.6
Ska3Q8C263 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ska3Q8C263 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ska3Q8C263 Mir877-201ENSMUST00000104738 85 ntBASIC11.32□□□□□ -0.6
Ska3Q8C263 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Ska3Q8C263 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.32□□□□□ -0.6
Ska3Q8C263 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Ska3Q8C263 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ska3Q8C263 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ska3Q8C263 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.32□□□□□ -0.6
Ska3Q8C263 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.32□□□□□ -0.6
Ska3Q8C263 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.32□□□□□ -0.6
Ska3Q8C263 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
Ska3Q8C263 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ska3Q8C263 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ska3Q8C263 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ska3Q8C263 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ska3Q8C263 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.32□□□□□ -0.6
Ska3Q8C263 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Ska3Q8C263 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ska3Q8C263 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.32□□□□□ -0.6
Ska3Q8C263 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms