Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 Gm13263-201ENSMUST00000121271 838 ntBASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 Gm19287-201ENSMUST00000203190 358 ntBASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 Gm15207-201ENSMUST00000119259 442 ntBASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 Gm8815-201ENSMUST00000173809 620 ntBASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 Gm4310-201ENSMUST00000177847 889 ntBASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 Gm43916-201ENSMUST00000205062 967 ntBASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 Gm2553-201ENSMUST00000215986 605 ntBASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sh3rf2Q8BZT2 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms