Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Xbp1-204ENSMUST00000149623 897 ntAPPRIS ALT2 TSL 2 BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 AC154347.2-201ENSMUST00000221223 715 ntTSL 3 BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 AC241621.2-201ENSMUST00000223991 2151 ntBASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd9Q8BYH8 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Gpx6-201ENSMUST00000004453 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Chd9Q8BYH8 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Chd9Q8BYH8 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Gm12179-201ENSMUST00000118344 1272 ntBASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Gm26901-204ENSMUST00000193732 631 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Gm43249-201ENSMUST00000200464 458 ntBASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Fibp-205ENSMUST00000225141 1209 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Chd9Q8BYH8 AC103672.1-201ENSMUST00000227502 365 ntBASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Gm5705-201ENSMUST00000066241 711 ntBASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Chd9Q8BYH8 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Mrps23-202ENSMUST00000107915 332 ntTSL 5 BASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Gm8019-201ENSMUST00000119317 587 ntBASIC9.35□□□□□ -0.91
Chd9Q8BYH8 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Gm37872-201ENSMUST00000192362 886 ntTSL 5 BASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Gm9523-201ENSMUST00000199146 1159 ntBASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Gm44216-201ENSMUST00000203942 157 ntBASIC9.35□□□□□ -0.91
Chd9Q8BYH8 AC169511.1-201ENSMUST00000227639 995 ntBASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC9.35□□□□□ -0.91
Chd9Q8BYH8 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Chd9Q8BYH8 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC9.34□□□□□ -0.91
Chd9Q8BYH8 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC9.34□□□□□ -0.91
Chd9Q8BYH8 Gm12774-201ENSMUST00000117881 416 ntBASIC9.34□□□□□ -0.91
Chd9Q8BYH8 Gm11660-201ENSMUST00000120955 412 ntBASIC9.34□□□□□ -0.91
Chd9Q8BYH8 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Chd9Q8BYH8 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Chd9Q8BYH8 Gm26982-201ENSMUST00000182250 1151 ntBASIC9.34□□□□□ -0.91
Chd9Q8BYH8 Gm29593-201ENSMUST00000189827 620 ntTSL 5 BASIC9.34□□□□□ -0.91
Chd9Q8BYH8 Gm37638-201ENSMUST00000194337 1123 ntBASIC9.34□□□□□ -0.91
Chd9Q8BYH8 Gm7082-201ENSMUST00000209880 969 ntBASIC9.34□□□□□ -0.91
Chd9Q8BYH8 AC161374.2-201ENSMUST00000223662 596 ntBASIC9.34□□□□□ -0.91
Chd9Q8BYH8 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Chd9Q8BYH8 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Chd9Q8BYH8 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Chd9Q8BYH8 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Chd9Q8BYH8 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Chd9Q8BYH8 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Chd9Q8BYH8 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Chd9Q8BYH8 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Chd9Q8BYH8 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Chd9Q8BYH8 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Chd9Q8BYH8 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC9.34□□□□□ -0.91
Chd9Q8BYH8 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Chd9Q8BYH8 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Chd9Q8BYH8 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Chd9Q8BYH8 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms