Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Ubr7Q8BU04 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ubr7Q8BU04 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ubr7Q8BU04 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Ubr7Q8BU04 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubr7Q8BU04 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubr7Q8BU04 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ubr7Q8BU04 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Ubr7Q8BU04 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubr7Q8BU04 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubr7Q8BU04 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.12□□□□□ -0.47
Ubr7Q8BU04 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubr7Q8BU04 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.12□□□□□ -0.47
Ubr7Q8BU04 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubr7Q8BU04 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubr7Q8BU04 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.12□□□□□ -0.47
Ubr7Q8BU04 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ubr7Q8BU04 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubr7Q8BU04 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubr7Q8BU04 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubr7Q8BU04 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ubr7Q8BU04 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Ubr7Q8BU04 Gm12616-201ENSMUST00000118594 382 ntBASIC12.12□□□□□ -0.47
Ubr7Q8BU04 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.12□□□□□ -0.47
Ubr7Q8BU04 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC12.12□□□□□ -0.47
Ubr7Q8BU04 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ubr7Q8BU04 Gm12624-201ENSMUST00000177615 382 ntBASIC12.12□□□□□ -0.47
Ubr7Q8BU04 Gm12621-201ENSMUST00000177760 382 ntBASIC12.12□□□□□ -0.47
Ubr7Q8BU04 Gm12615-201ENSMUST00000177970 382 ntBASIC12.12□□□□□ -0.47
Ubr7Q8BU04 Gm12622-201ENSMUST00000177975 382 ntBASIC12.12□□□□□ -0.47
Ubr7Q8BU04 Gm8546-201ENSMUST00000178288 1264 ntBASIC12.12□□□□□ -0.47
Ubr7Q8BU04 Gm12627-201ENSMUST00000178412 382 ntBASIC12.12□□□□□ -0.47
Ubr7Q8BU04 Gm12625-201ENSMUST00000179122 382 ntBASIC12.12□□□□□ -0.47
Ubr7Q8BU04 Gm12614-201ENSMUST00000179586 382 ntBASIC12.12□□□□□ -0.47
Ubr7Q8BU04 Gm12613-201ENSMUST00000180323 382 ntBASIC12.12□□□□□ -0.47
Ubr7Q8BU04 Gm3508-201ENSMUST00000186012 792 ntBASIC12.12□□□□□ -0.47
Ubr7Q8BU04 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC12.12□□□□□ -0.47
Ubr7Q8BU04 Gm45575-201ENSMUST00000210283 548 ntBASIC12.12□□□□□ -0.47
Ubr7Q8BU04 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ubr7Q8BU04 Gm1821-202ENSMUST00000227415 750 ntBASIC12.12□□□□□ -0.47
Ubr7Q8BU04 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubr7Q8BU04 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubr7Q8BU04 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.12□□□□□ -0.47
Ubr7Q8BU04 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubr7Q8BU04 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ubr7Q8BU04 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ubr7Q8BU04 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubr7Q8BU04 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubr7Q8BU04 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ubr7Q8BU04 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.12□□□□□ -0.47
Ubr7Q8BU04 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.12□□□□□ -0.47
Ubr7Q8BU04 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ubr7Q8BU04 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubr7Q8BU04 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubr7Q8BU04 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubr7Q8BU04 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubr7Q8BU04 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.12□□□□□ -0.47
Ubr7Q8BU04 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ubr7Q8BU04 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ubr7Q8BU04 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ubr7Q8BU04 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ubr7Q8BU04 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ubr7Q8BU04 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ubr7Q8BU04 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ubr7Q8BU04 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ubr7Q8BU04 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ubr7Q8BU04 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ubr7Q8BU04 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.11□□□□□ -0.47
Ubr7Q8BU04 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ubr7Q8BU04 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ubr7Q8BU04 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ubr7Q8BU04 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ubr7Q8BU04 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ubr7Q8BU04 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ubr7Q8BU04 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.11□□□□□ -0.47
Ubr7Q8BU04 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ubr7Q8BU04 Gm13809-201ENSMUST00000117921 597 ntBASIC12.11□□□□□ -0.47
Ubr7Q8BU04 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.11□□□□□ -0.47
Ubr7Q8BU04 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.11□□□□□ -0.47
Ubr7Q8BU04 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.11□□□□□ -0.47
Ubr7Q8BU04 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Ubr7Q8BU04 Gm37835-201ENSMUST00000193305 361 ntBASIC12.11□□□□□ -0.47
Ubr7Q8BU04 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ubr7Q8BU04 Ginm1-202ENSMUST00000065124 300 ntBASIC12.11□□□□□ -0.47
Ubr7Q8BU04 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ubr7Q8BU04 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ubr7Q8BU04 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ubr7Q8BU04 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ubr7Q8BU04 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ubr7Q8BU04 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ubr7Q8BU04 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ubr7Q8BU04 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ubr7Q8BU04 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ubr7Q8BU04 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ubr7Q8BU04 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ubr7Q8BU04 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ubr7Q8BU04 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ubr7Q8BU04 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ubr7Q8BU04 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ubr7Q8BU04 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms