Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Gm16379-201ENSMUST00000161469 348 ntBASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Gm27023-201ENSMUST00000182372 285 ntBASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Gm8602-201ENSMUST00000184045 607 ntBASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Gm8762-201ENSMUST00000193486 339 ntBASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Snora73a-201ENSMUST00000082453 205 ntBASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Chmp2bQ8BJF9 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp2bQ8BJF9 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp2bQ8BJF9 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.31□□□□□ -0.44
Chmp2bQ8BJF9 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Chmp2bQ8BJF9 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp2bQ8BJF9 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp2bQ8BJF9 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Chmp2bQ8BJF9 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.31□□□□□ -0.44
Chmp2bQ8BJF9 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp2bQ8BJF9 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp2bQ8BJF9 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp2bQ8BJF9 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp2bQ8BJF9 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Chmp2bQ8BJF9 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.31□□□□□ -0.44
Chmp2bQ8BJF9 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.31□□□□□ -0.44
Chmp2bQ8BJF9 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.31□□□□□ -0.44
Chmp2bQ8BJF9 Gm24548-201ENSMUST00000158650 108 ntBASIC12.31□□□□□ -0.44
Chmp2bQ8BJF9 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Chmp2bQ8BJF9 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.31□□□□□ -0.44
Chmp2bQ8BJF9 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.31□□□□□ -0.44
Chmp2bQ8BJF9 Gm6266-201ENSMUST00000203844 806 ntBASIC12.31□□□□□ -0.44
Chmp2bQ8BJF9 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Chmp2bQ8BJF9 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.31□□□□□ -0.44
Chmp2bQ8BJF9 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp2bQ8BJF9 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp2bQ8BJF9 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp2bQ8BJF9 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp2bQ8BJF9 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp2bQ8BJF9 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp2bQ8BJF9 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp2bQ8BJF9 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp2bQ8BJF9 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp2bQ8BJF9 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp2bQ8BJF9 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp2bQ8BJF9 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp2bQ8BJF9 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Chmp2bQ8BJF9 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp2bQ8BJF9 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Chmp2bQ8BJF9 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp2bQ8BJF9 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.31□□□□□ -0.44
Chmp2bQ8BJF9 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp2bQ8BJF9 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.31□□□□□ -0.44
Chmp2bQ8BJF9 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp2bQ8BJF9 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp2bQ8BJF9 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.31□□□□□ -0.44
Chmp2bQ8BJF9 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 Gm13570-201ENSMUST00000140763 309 ntBASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms