Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Gm12957-201ENSMUST00000117835 377 ntBASIC11.63□□□□□ -0.55
Rnf38Q8BI21 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf38Q8BI21 Gm13570-201ENSMUST00000140763 309 ntBASIC11.63□□□□□ -0.55
Rnf38Q8BI21 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Rnf38Q8BI21 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.63□□□□□ -0.55
Rnf38Q8BI21 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.63□□□□□ -0.55
Rnf38Q8BI21 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf38Q8BI21 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.63□□□□□ -0.55
Rnf38Q8BI21 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf38Q8BI21 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Rnf38Q8BI21 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Rnf38Q8BI21 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf38Q8BI21 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Rnf38Q8BI21 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf38Q8BI21 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Rnf38Q8BI21 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Rnf38Q8BI21 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf38Q8BI21 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Rnf38Q8BI21 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf38Q8BI21 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf38Q8BI21 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf38Q8BI21 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Rnf38Q8BI21 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf38Q8BI21 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf38Q8BI21 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf38Q8BI21 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf38Q8BI21 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf38Q8BI21 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf38Q8BI21 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf38Q8BI21 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf38Q8BI21 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf38Q8BI21 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Rnf38Q8BI21 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf38Q8BI21 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.62□□□□□ -0.55
Rnf38Q8BI21 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf38Q8BI21 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf38Q8BI21 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf38Q8BI21 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf38Q8BI21 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Rnf38Q8BI21 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf38Q8BI21 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf38Q8BI21 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf38Q8BI21 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf38Q8BI21 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf38Q8BI21 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Rnf38Q8BI21 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf38Q8BI21 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf38Q8BI21 Gm12742-201ENSMUST00000117326 410 ntBASIC11.62□□□□□ -0.55
Rnf38Q8BI21 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.62□□□□□ -0.55
Rnf38Q8BI21 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Rnf38Q8BI21 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf38Q8BI21 Gm37008-201ENSMUST00000195712 319 ntBASIC11.62□□□□□ -0.55
Rnf38Q8BI21 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.62□□□□□ -0.55
Rnf38Q8BI21 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf38Q8BI21 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.62□□□□□ -0.55
Rnf38Q8BI21 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.62□□□□□ -0.55
Rnf38Q8BI21 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf38Q8BI21 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf38Q8BI21 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Rnf38Q8BI21 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Rnf38Q8BI21 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Rnf38Q8BI21 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.62□□□□□ -0.55
Rnf38Q8BI21 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf38Q8BI21 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf38Q8BI21 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Rnf38Q8BI21 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf38Q8BI21 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf38Q8BI21 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.62□□□□□ -0.55
Rnf38Q8BI21 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf38Q8BI21 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf38Q8BI21 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf38Q8BI21 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Rnf38Q8BI21 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf38Q8BI21 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Gm12058-201ENSMUST00000118614 437 ntBASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Gm24548-201ENSMUST00000158650 108 ntBASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms