Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Gm6218-201ENSMUST00000219812 628 ntBASIC10.49□□□□□ -0.73
Slc5a7Q8BGY9 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc5a7Q8BGY9 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc5a7Q8BGY9 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc5a7Q8BGY9 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.49□□□□□ -0.73
Slc5a7Q8BGY9 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Slc5a7Q8BGY9 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.49□□□□□ -0.73
Slc5a7Q8BGY9 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc5a7Q8BGY9 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc5a7Q8BGY9 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc5a7Q8BGY9 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc5a7Q8BGY9 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.49□□□□□ -0.73
Slc5a7Q8BGY9 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Slc5a7Q8BGY9 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Slc5a7Q8BGY9 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Slc5a7Q8BGY9 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Slc5a7Q8BGY9 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Slc5a7Q8BGY9 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10.49□□□□□ -0.73
Slc5a7Q8BGY9 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc5a7Q8BGY9 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc5a7Q8BGY9 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc5a7Q8BGY9 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc5a7Q8BGY9 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Slc5a7Q8BGY9 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC10.49□□□□□ -0.73
Slc5a7Q8BGY9 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Slc5a7Q8BGY9 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc5a7Q8BGY9 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Slc5a7Q8BGY9 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc5a7Q8BGY9 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.49□□□□□ -0.73
Slc5a7Q8BGY9 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Gm13369-201ENSMUST00000119442 987 ntBASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Gm13492-201ENSMUST00000119772 665 ntBASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Gm37935-201ENSMUST00000192012 982 ntBASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Gm43002-201ENSMUST00000200310 155 ntBASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Gm38671-201ENSMUST00000200573 130 ntBASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Gm8463-201ENSMUST00000208573 613 ntBASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Gm19163-201ENSMUST00000223313 780 ntBASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Gm8228-201ENSMUST00000189949 2192 ntBASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc5a7Q8BGY9 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Slc5a7Q8BGY9 AC153506.1-201ENSMUST00000218768 2915 ntBASIC10.47□□□□□ -0.73
Slc5a7Q8BGY9 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Slc5a7Q8BGY9 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.47□□□□□ -0.73
Slc5a7Q8BGY9 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms