Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Ubp1Q811S7 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ubp1Q811S7 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Ubp1Q811S7 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubp1Q811S7 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubp1Q811S7 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubp1Q811S7 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubp1Q811S7 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ubp1Q811S7 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubp1Q811S7 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Ubp1Q811S7 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Ubp1Q811S7 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubp1Q811S7 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ubp1Q811S7 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubp1Q811S7 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ubp1Q811S7 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubp1Q811S7 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Ubp1Q811S7 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Ubp1Q811S7 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Ubp1Q811S7 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubp1Q811S7 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubp1Q811S7 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ubp1Q811S7 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubp1Q811S7 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.91□□□□□ -0.5
Ubp1Q811S7 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubp1Q811S7 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ubp1Q811S7 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.91□□□□□ -0.5
Ubp1Q811S7 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubp1Q811S7 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ubp1Q811S7 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ubp1Q811S7 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubp1Q811S7 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ubp1Q811S7 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.91□□□□□ -0.5
Ubp1Q811S7 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.91□□□□□ -0.5
Ubp1Q811S7 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ubp1Q811S7 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.91□□□□□ -0.5
Ubp1Q811S7 Gm38247-201ENSMUST00000194675 433 ntBASIC11.91□□□□□ -0.5
Ubp1Q811S7 Gm43037-201ENSMUST00000196808 250 ntBASIC11.91□□□□□ -0.5
Ubp1Q811S7 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.91□□□□□ -0.5
Ubp1Q811S7 Gm45598-202ENSMUST00000210719 986 ntBASIC11.91□□□□□ -0.5
Ubp1Q811S7 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.91□□□□□ -0.5
Ubp1Q811S7 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ubp1Q811S7 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.91□□□□□ -0.5
Ubp1Q811S7 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubp1Q811S7 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubp1Q811S7 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubp1Q811S7 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Ubp1Q811S7 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubp1Q811S7 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubp1Q811S7 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubp1Q811S7 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.91□□□□□ -0.5
Ubp1Q811S7 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubp1Q811S7 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Ubp1Q811S7 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Ubp1Q811S7 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Ubp1Q811S7 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubp1Q811S7 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubp1Q811S7 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ubp1Q811S7 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubp1Q811S7 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.91□□□□□ -0.5
Ubp1Q811S7 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubp1Q811S7 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ubp1Q811S7 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubp1Q811S7 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubp1Q811S7 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubp1Q811S7 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.9□□□□□ -0.5
Ubp1Q811S7 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ubp1Q811S7 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ubp1Q811S7 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubp1Q811S7 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubp1Q811S7 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ubp1Q811S7 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubp1Q811S7 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubp1Q811S7 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubp1Q811S7 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubp1Q811S7 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ubp1Q811S7 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubp1Q811S7 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubp1Q811S7 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubp1Q811S7 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ubp1Q811S7 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.9□□□□□ -0.5
Ubp1Q811S7 Gm15808-201ENSMUST00000119046 604 ntBASIC11.9□□□□□ -0.5
Ubp1Q811S7 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.9□□□□□ -0.5
Ubp1Q811S7 Gm7722-201ENSMUST00000120646 741 ntBASIC11.9□□□□□ -0.5
Ubp1Q811S7 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ubp1Q811S7 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.9□□□□□ -0.5
Ubp1Q811S7 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.9□□□□□ -0.5
Ubp1Q811S7 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ubp1Q811S7 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.9□□□□□ -0.5
Ubp1Q811S7 Gm26361-201ENSMUST00000158868 186 ntBASIC11.9□□□□□ -0.5
Ubp1Q811S7 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubp1Q811S7 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ubp1Q811S7 Gm4857-201ENSMUST00000192718 785 ntBASIC11.9□□□□□ -0.5
Ubp1Q811S7 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.9□□□□□ -0.5
Ubp1Q811S7 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ubp1Q811S7 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.9□□□□□ -0.5
Ubp1Q811S7 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ubp1Q811S7 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.9□□□□□ -0.5
Ubp1Q811S7 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Ubp1Q811S7 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms