Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ush1gQ80T11 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ush1gQ80T11 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Ush1gQ80T11 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Ush1gQ80T11 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ush1gQ80T11 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ush1gQ80T11 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ush1gQ80T11 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ush1gQ80T11 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC13.16□□□□□ -0.3
Ush1gQ80T11 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ush1gQ80T11 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Ush1gQ80T11 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ush1gQ80T11 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ush1gQ80T11 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC13.16□□□□□ -0.3
Ush1gQ80T11 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC13.16□□□□□ -0.3
Ush1gQ80T11 Gm16397-201ENSMUST00000122201 494 ntBASIC13.16□□□□□ -0.3
Ush1gQ80T11 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ush1gQ80T11 Mir6546-201ENSMUST00000184460 62 ntBASIC13.16□□□□□ -0.3
Ush1gQ80T11 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC13.16□□□□□ -0.3
Ush1gQ80T11 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ush1gQ80T11 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC13.16□□□□□ -0.3
Ush1gQ80T11 CT030637.1-201ENSMUST00000228016 669 ntBASIC13.16□□□□□ -0.3
Ush1gQ80T11 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ush1gQ80T11 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ush1gQ80T11 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.16□□□□□ -0.3
Ush1gQ80T11 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ush1gQ80T11 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ush1gQ80T11 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ush1gQ80T11 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ush1gQ80T11 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ush1gQ80T11 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ush1gQ80T11 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ush1gQ80T11 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ush1gQ80T11 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ush1gQ80T11 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ush1gQ80T11 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.15□□□□□ -0.3
Ush1gQ80T11 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.15□□□□□ -0.3
Ush1gQ80T11 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ush1gQ80T11 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ush1gQ80T11 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ush1gQ80T11 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ush1gQ80T11 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ush1gQ80T11 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ush1gQ80T11 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ush1gQ80T11 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ush1gQ80T11 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ush1gQ80T11 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ush1gQ80T11 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ush1gQ80T11 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ush1gQ80T11 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ush1gQ80T11 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC13.15□□□□□ -0.3
Ush1gQ80T11 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC13.15□□□□□ -0.3
Ush1gQ80T11 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC13.15□□□□□ -0.3
Ush1gQ80T11 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ush1gQ80T11 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13.15□□□□□ -0.3
Ush1gQ80T11 Rprl1-201ENSMUST00000158050 327 ntBASIC13.15□□□□□ -0.3
Ush1gQ80T11 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ush1gQ80T11 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Ush1gQ80T11 Gm8343-201ENSMUST00000182705 994 ntBASIC13.15□□□□□ -0.3
Ush1gQ80T11 Gm9358-201ENSMUST00000183067 927 ntBASIC13.15□□□□□ -0.3
Ush1gQ80T11 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC13.15□□□□□ -0.3
Ush1gQ80T11 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC13.15□□□□□ -0.3
Ush1gQ80T11 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ush1gQ80T11 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC13.15□□□□□ -0.3
Ush1gQ80T11 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.15□□□□□ -0.3
Ush1gQ80T11 Gm45398-201ENSMUST00000210561 165 ntBASIC13.15□□□□□ -0.3
Ush1gQ80T11 Gm45909-201ENSMUST00000212413 1031 ntBASIC13.15□□□□□ -0.3
Ush1gQ80T11 Gm10752-201ENSMUST00000218348 729 ntBASIC13.15□□□□□ -0.3
Ush1gQ80T11 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC13.15□□□□□ -0.3
Ush1gQ80T11 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ush1gQ80T11 Mir219a-1-201ENSMUST00000083621 110 ntBASIC13.15□□□□□ -0.3
Ush1gQ80T11 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ush1gQ80T11 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Ush1gQ80T11 AC091458.1-201ENSMUST00000220902 1361 ntBASIC13.15□□□□□ -0.3
Ush1gQ80T11 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ush1gQ80T11 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ush1gQ80T11 Gm4780-202ENSMUST00000215200 2644 ntBASIC13.15□□□□□ -0.3
Ush1gQ80T11 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ush1gQ80T11 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ush1gQ80T11 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ush1gQ80T11 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ush1gQ80T11 Gm28719-201ENSMUST00000187779 1757 ntBASIC13.15□□□□□ -0.31
Ush1gQ80T11 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ush1gQ80T11 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ush1gQ80T11 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ush1gQ80T11 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Ush1gQ80T11 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Ush1gQ80T11 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ush1gQ80T11 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ush1gQ80T11 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
Ush1gQ80T11 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ush1gQ80T11 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ush1gQ80T11 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Ush1gQ80T11 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ush1gQ80T11 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ush1gQ80T11 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ush1gQ80T11 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ush1gQ80T11 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ush1gQ80T11 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.14□□□□□ -0.31
Ush1gQ80T11 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms