Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Vma21Q78T54 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Vma21Q78T54 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Vma21Q78T54 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Vma21Q78T54 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC9.77□□□□□ -0.85
Vma21Q78T54 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Vma21Q78T54 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Vma21Q78T54 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Vma21Q78T54 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Vma21Q78T54 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Vma21Q78T54 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Vma21Q78T54 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC9.77□□□□□ -0.85
Vma21Q78T54 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Vma21Q78T54 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Vma21Q78T54 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Vma21Q78T54 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Vma21Q78T54 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Vma21Q78T54 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Vma21Q78T54 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC9.77□□□□□ -0.85
Vma21Q78T54 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Vma21Q78T54 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Vma21Q78T54 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC9.76□□□□□ -0.85
Vma21Q78T54 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Vma21Q78T54 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Vma21Q78T54 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
Vma21Q78T54 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC9.76□□□□□ -0.85
Vma21Q78T54 Gm8131-201ENSMUST00000213783 1570 ntBASIC9.76□□□□□ -0.85
Vma21Q78T54 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Vma21Q78T54 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Vma21Q78T54 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Vma21Q78T54 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Vma21Q78T54 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC9.76□□□□□ -0.85
Vma21Q78T54 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Vma21Q78T54 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Vma21Q78T54 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Vma21Q78T54 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Vma21Q78T54 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Vma21Q78T54 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Vma21Q78T54 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Vma21Q78T54 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Vma21Q78T54 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC9.76□□□□□ -0.85
Vma21Q78T54 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Vma21Q78T54 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC9.76□□□□□ -0.85
Vma21Q78T54 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC9.76□□□□□ -0.85
Vma21Q78T54 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Vma21Q78T54 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC9.76□□□□□ -0.85
Vma21Q78T54 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC9.76□□□□□ -0.85
Vma21Q78T54 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Vma21Q78T54 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC9.76□□□□□ -0.85
Vma21Q78T54 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Vma21Q78T54 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Vma21Q78T54 Gm18711-201ENSMUST00000199341 750 ntBASIC9.76□□□□□ -0.85
Vma21Q78T54 Gm18636-201ENSMUST00000218846 1066 ntBASIC9.76□□□□□ -0.85
Vma21Q78T54 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Vma21Q78T54 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Vma21Q78T54 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Vma21Q78T54 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Vma21Q78T54 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Vma21Q78T54 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC9.76□□□□□ -0.85
Vma21Q78T54 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC9.76□□□□□ -0.85
Vma21Q78T54 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC9.76□□□□□ -0.85
Vma21Q78T54 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Vma21Q78T54 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC9.76□□□□□ -0.85
Vma21Q78T54 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Vma21Q78T54 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Vma21Q78T54 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Vma21Q78T54 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Vma21Q78T54 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Vma21Q78T54 Gm15163-201ENSMUST00000120749 1302 ntBASIC9.76□□□□□ -0.85
Vma21Q78T54 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Vma21Q78T54 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC9.76□□□□□ -0.85
Vma21Q78T54 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Vma21Q78T54 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Vma21Q78T54 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC9.76□□□□□ -0.85
Vma21Q78T54 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Vma21Q78T54 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Vma21Q78T54 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Vma21Q78T54 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Vma21Q78T54 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Vma21Q78T54 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Vma21Q78T54 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Vma21Q78T54 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Vma21Q78T54 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Vma21Q78T54 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Vma21Q78T54 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Vma21Q78T54 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Vma21Q78T54 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Vma21Q78T54 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC9.75□□□□□ -0.85
Vma21Q78T54 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC9.75□□□□□ -0.85
Vma21Q78T54 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC9.75□□□□□ -0.85
Vma21Q78T54 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Vma21Q78T54 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Vma21Q78T54 Gm10434-201ENSMUST00000101158 471 ntBASIC9.75□□□□□ -0.85
Vma21Q78T54 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Vma21Q78T54 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Vma21Q78T54 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC9.75□□□□□ -0.85
Vma21Q78T54 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC9.75□□□□□ -0.85
Vma21Q78T54 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC9.75□□□□□ -0.85
Vma21Q78T54 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Vma21Q78T54 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms