Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ubfd1Q78JW9 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ubfd1Q78JW9 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ubfd1Q78JW9 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
Ubfd1Q78JW9 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ubfd1Q78JW9 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.71□□□□□ -0.53
Ubfd1Q78JW9 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.71□□□□□ -0.53
Ubfd1Q78JW9 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ubfd1Q78JW9 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.71□□□□□ -0.53
Ubfd1Q78JW9 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.71□□□□□ -0.53
Ubfd1Q78JW9 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ubfd1Q78JW9 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ubfd1Q78JW9 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ubfd1Q78JW9 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ubfd1Q78JW9 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Ubfd1Q78JW9 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.71□□□□□ -0.53
Ubfd1Q78JW9 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ubfd1Q78JW9 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Ubfd1Q78JW9 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
Ubfd1Q78JW9 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ubfd1Q78JW9 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC11.71□□□□□ -0.53
Ubfd1Q78JW9 Gm15432-201ENSMUST00000121106 195 ntBASIC11.71□□□□□ -0.53
Ubfd1Q78JW9 Gm8199-201ENSMUST00000121323 823 ntBASIC11.71□□□□□ -0.53
Ubfd1Q78JW9 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.71□□□□□ -0.53
Ubfd1Q78JW9 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.71□□□□□ -0.53
Ubfd1Q78JW9 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.71□□□□□ -0.53
Ubfd1Q78JW9 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ubfd1Q78JW9 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.71□□□□□ -0.53
Ubfd1Q78JW9 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.71□□□□□ -0.53
Ubfd1Q78JW9 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ubfd1Q78JW9 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Ubfd1Q78JW9 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Ubfd1Q78JW9 Gm9211-201ENSMUST00000182882 975 ntBASIC11.71□□□□□ -0.53
Ubfd1Q78JW9 Gm9555-201ENSMUST00000200908 583 ntBASIC11.71□□□□□ -0.53
Ubfd1Q78JW9 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.71□□□□□ -0.53
Ubfd1Q78JW9 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ubfd1Q78JW9 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ubfd1Q78JW9 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ubfd1Q78JW9 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ubfd1Q78JW9 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ubfd1Q78JW9 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ubfd1Q78JW9 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ubfd1Q78JW9 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Ubfd1Q78JW9 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ubfd1Q78JW9 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ubfd1Q78JW9 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.71□□□□□ -0.54
Ubfd1Q78JW9 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ubfd1Q78JW9 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ubfd1Q78JW9 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.71□□□□□ -0.54
Ubfd1Q78JW9 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ubfd1Q78JW9 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ubfd1Q78JW9 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ubfd1Q78JW9 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ubfd1Q78JW9 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubfd1Q78JW9 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubfd1Q78JW9 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Ubfd1Q78JW9 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubfd1Q78JW9 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubfd1Q78JW9 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ubfd1Q78JW9 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.7□□□□□ -0.54
Ubfd1Q78JW9 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubfd1Q78JW9 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubfd1Q78JW9 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.7□□□□□ -0.54
Ubfd1Q78JW9 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubfd1Q78JW9 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ubfd1Q78JW9 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.7□□□□□ -0.54
Ubfd1Q78JW9 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubfd1Q78JW9 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubfd1Q78JW9 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.7□□□□□ -0.54
Ubfd1Q78JW9 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ubfd1Q78JW9 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubfd1Q78JW9 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubfd1Q78JW9 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Ubfd1Q78JW9 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubfd1Q78JW9 Gm13809-201ENSMUST00000117921 597 ntBASIC11.7□□□□□ -0.54
Ubfd1Q78JW9 Gm13461-201ENSMUST00000120980 662 ntBASIC11.7□□□□□ -0.54
Ubfd1Q78JW9 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubfd1Q78JW9 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.7□□□□□ -0.54
Ubfd1Q78JW9 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubfd1Q78JW9 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Ubfd1Q78JW9 Gm8815-201ENSMUST00000173809 620 ntBASIC11.7□□□□□ -0.54
Ubfd1Q78JW9 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Ubfd1Q78JW9 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ubfd1Q78JW9 Gm37246-201ENSMUST00000192665 835 ntBASIC11.7□□□□□ -0.54
Ubfd1Q78JW9 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubfd1Q78JW9 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.7□□□□□ -0.54
Ubfd1Q78JW9 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Ubfd1Q78JW9 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubfd1Q78JW9 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.7□□□□□ -0.54
Ubfd1Q78JW9 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ubfd1Q78JW9 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubfd1Q78JW9 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubfd1Q78JW9 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubfd1Q78JW9 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.7□□□□□ -0.54
Ubfd1Q78JW9 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.7□□□□□ -0.54
Ubfd1Q78JW9 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.7□□□□□ -0.54
Ubfd1Q78JW9 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ubfd1Q78JW9 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ubfd1Q78JW9 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubfd1Q78JW9 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms