Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.52□□□□□ -0.41
Cspg5Q71M36 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cspg5Q71M36 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cspg5Q71M36 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Cspg5Q71M36 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cspg5Q71M36 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.52□□□□□ -0.41
Cspg5Q71M36 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cspg5Q71M36 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Cspg5Q71M36 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cspg5Q71M36 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cspg5Q71M36 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cspg5Q71M36 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Cspg5Q71M36 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cspg5Q71M36 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.52□□□□□ -0.41
Cspg5Q71M36 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.52□□□□□ -0.41
Cspg5Q71M36 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cspg5Q71M36 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cspg5Q71M36 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cspg5Q71M36 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.52□□□□□ -0.41
Cspg5Q71M36 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cspg5Q71M36 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.52□□□□□ -0.41
Cspg5Q71M36 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cspg5Q71M36 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cspg5Q71M36 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.52□□□□□ -0.41
Cspg5Q71M36 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.51□□□□□ -0.41
Cspg5Q71M36 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cspg5Q71M36 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cspg5Q71M36 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cspg5Q71M36 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Cspg5Q71M36 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cspg5Q71M36 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.51□□□□□ -0.41
Cspg5Q71M36 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cspg5Q71M36 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cspg5Q71M36 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cspg5Q71M36 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.51□□□□□ -0.41
Cspg5Q71M36 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cspg5Q71M36 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cspg5Q71M36 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cspg5Q71M36 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC12.51□□□□□ -0.41
Cspg5Q71M36 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.51□□□□□ -0.41
Cspg5Q71M36 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.51□□□□□ -0.41
Cspg5Q71M36 AY036118-201ENSMUST00000200021 923 ntBASIC12.51□□□□□ -0.41
Cspg5Q71M36 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.51□□□□□ -0.41
Cspg5Q71M36 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.51□□□□□ -0.41
Cspg5Q71M36 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cspg5Q71M36 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Cspg5Q71M36 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC12.51□□□□□ -0.41
Cspg5Q71M36 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.51□□□□□ -0.41
Cspg5Q71M36 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cspg5Q71M36 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cspg5Q71M36 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cspg5Q71M36 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cspg5Q71M36 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cspg5Q71M36 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cspg5Q71M36 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Cspg5Q71M36 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cspg5Q71M36 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cspg5Q71M36 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cspg5Q71M36 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cspg5Q71M36 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cspg5Q71M36 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.51□□□□□ -0.41
Cspg5Q71M36 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.51□□□□□ -0.41
Cspg5Q71M36 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cspg5Q71M36 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cspg5Q71M36 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cspg5Q71M36 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cspg5Q71M36 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cspg5Q71M36 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cspg5Q71M36 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cspg5Q71M36 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cspg5Q71M36 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cspg5Q71M36 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.5□□□□□ -0.41
Cspg5Q71M36 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.5□□□□□ -0.41
Cspg5Q71M36 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Cspg5Q71M36 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cspg5Q71M36 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cspg5Q71M36 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cspg5Q71M36 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cspg5Q71M36 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Cspg5Q71M36 Gm12015-201ENSMUST00000117065 843 ntBASIC12.5□□□□□ -0.41
Cspg5Q71M36 Gm12501-201ENSMUST00000119163 529 ntBASIC12.5□□□□□ -0.41
Cspg5Q71M36 Gm13813-201ENSMUST00000120998 787 ntBASIC12.5□□□□□ -0.41
Cspg5Q71M36 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.5□□□□□ -0.41
Cspg5Q71M36 Gm5778-201ENSMUST00000171003 1072 ntBASIC12.5□□□□□ -0.41
Cspg5Q71M36 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cspg5Q71M36 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC12.5□□□□□ -0.41
Cspg5Q71M36 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC12.5□□□□□ -0.41
Cspg5Q71M36 Gm42937-201ENSMUST00000197360 752 ntBASIC12.5□□□□□ -0.41
Cspg5Q71M36 AC166992.1-201ENSMUST00000216356 565 ntBASIC12.5□□□□□ -0.41
Cspg5Q71M36 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cspg5Q71M36 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12.5□□□□□ -0.41
Cspg5Q71M36 Gm10179-201ENSMUST00000086233 688 ntBASIC12.5□□□□□ -0.41
Cspg5Q71M36 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cspg5Q71M36 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cspg5Q71M36 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Cspg5Q71M36 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cspg5Q71M36 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cspg5Q71M36 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cspg5Q71M36 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cspg5Q71M36 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms