Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 Gm13549-201ENSMUST00000118339 796 ntBASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 Gm15615-201ENSMUST00000118876 198 ntBASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 Gm11244-201ENSMUST00000121243 237 ntBASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 Gm10807-201ENSMUST00000177134 795 ntBASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 AC159376.1-201ENSMUST00000218504 630 ntBASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 Gm23105-201ENSMUST00000083719 134 ntBASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 Gm9796-201ENSMUST00000062249 2250 ntBASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx55Q6ZPL9 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Ddx55Q6ZPL9 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx55Q6ZPL9 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx55Q6ZPL9 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx55Q6ZPL9 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx55Q6ZPL9 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ddx55Q6ZPL9 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Ddx55Q6ZPL9 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx55Q6ZPL9 Gm17213-201ENSMUST00000165161 1360 ntBASIC13.62□□□□□ -0.23
Ddx55Q6ZPL9 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx55Q6ZPL9 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx55Q6ZPL9 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.62□□□□□ -0.23
Ddx55Q6ZPL9 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC13.62□□□□□ -0.23
Ddx55Q6ZPL9 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Ddx55Q6ZPL9 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx55Q6ZPL9 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx55Q6ZPL9 Gm9192-201ENSMUST00000183221 985 ntBASIC13.62□□□□□ -0.23
Ddx55Q6ZPL9 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC13.62□□□□□ -0.23
Ddx55Q6ZPL9 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx55Q6ZPL9 Gm6722-201ENSMUST00000221586 390 ntBASIC13.62□□□□□ -0.23
Ddx55Q6ZPL9 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.62□□□□□ -0.23
Ddx55Q6ZPL9 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Ddx55Q6ZPL9 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx55Q6ZPL9 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx55Q6ZPL9 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx55Q6ZPL9 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx55Q6ZPL9 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx55Q6ZPL9 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Ddx55Q6ZPL9 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx55Q6ZPL9 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx55Q6ZPL9 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Ddx55Q6ZPL9 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx55Q6ZPL9 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx55Q6ZPL9 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ddx55Q6ZPL9 Gm15784-201ENSMUST00000120260 1462 ntBASIC13.61□□□□□ -0.23
Ddx55Q6ZPL9 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx55Q6ZPL9 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx55Q6ZPL9 Gm4900-201ENSMUST00000222046 1628 ntBASIC13.61□□□□□ -0.23
Ddx55Q6ZPL9 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.61□□□□□ -0.23
Ddx55Q6ZPL9 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ddx55Q6ZPL9 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx55Q6ZPL9 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ddx55Q6ZPL9 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx55Q6ZPL9 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx55Q6ZPL9 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx55Q6ZPL9 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ddx55Q6ZPL9 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx55Q6ZPL9 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx55Q6ZPL9 Gm21358-201ENSMUST00000191645 1659 ntBASIC13.61□□□□□ -0.23
Ddx55Q6ZPL9 Gm14892-201ENSMUST00000117636 267 ntBASIC13.61□□□□□ -0.23
Ddx55Q6ZPL9 Gm10169-201ENSMUST00000121822 348 ntBASIC13.61□□□□□ -0.23
Ddx55Q6ZPL9 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx55Q6ZPL9 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms