Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scaf4Q6PFF0 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scaf4Q6PFF0 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scaf4Q6PFF0 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scaf4Q6PFF0 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.83□□□□□ -0.52
Scaf4Q6PFF0 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Scaf4Q6PFF0 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scaf4Q6PFF0 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scaf4Q6PFF0 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Scaf4Q6PFF0 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.83□□□□□ -0.52
Scaf4Q6PFF0 Rprl1-201ENSMUST00000158050 327 ntBASIC11.83□□□□□ -0.52
Scaf4Q6PFF0 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Scaf4Q6PFF0 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Scaf4Q6PFF0 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.83□□□□□ -0.52
Scaf4Q6PFF0 Gm17931-201ENSMUST00000208132 634 ntBASIC11.83□□□□□ -0.52
Scaf4Q6PFF0 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scaf4Q6PFF0 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scaf4Q6PFF0 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Scaf4Q6PFF0 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.83□□□□□ -0.52
Scaf4Q6PFF0 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scaf4Q6PFF0 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scaf4Q6PFF0 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scaf4Q6PFF0 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.83□□□□□ -0.52
Scaf4Q6PFF0 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.83□□□□□ -0.52
Scaf4Q6PFF0 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Scaf4Q6PFF0 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scaf4Q6PFF0 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scaf4Q6PFF0 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scaf4Q6PFF0 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scaf4Q6PFF0 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scaf4Q6PFF0 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scaf4Q6PFF0 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Scaf4Q6PFF0 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Scaf4Q6PFF0 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.83□□□□□ -0.52
Scaf4Q6PFF0 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.83□□□□□ -0.52
Scaf4Q6PFF0 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Scaf4Q6PFF0 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scaf4Q6PFF0 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scaf4Q6PFF0 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.82□□□□□ -0.52
Scaf4Q6PFF0 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scaf4Q6PFF0 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.82□□□□□ -0.52
Scaf4Q6PFF0 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scaf4Q6PFF0 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Scaf4Q6PFF0 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Scaf4Q6PFF0 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.82□□□□□ -0.52
Scaf4Q6PFF0 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Scaf4Q6PFF0 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scaf4Q6PFF0 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scaf4Q6PFF0 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scaf4Q6PFF0 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Scaf4Q6PFF0 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.82□□□□□ -0.52
Scaf4Q6PFF0 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Scaf4Q6PFF0 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Scaf4Q6PFF0 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.82□□□□□ -0.52
Scaf4Q6PFF0 Gm27023-201ENSMUST00000182372 285 ntBASIC11.82□□□□□ -0.52
Scaf4Q6PFF0 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Scaf4Q6PFF0 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.82□□□□□ -0.52
Scaf4Q6PFF0 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Scaf4Q6PFF0 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scaf4Q6PFF0 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scaf4Q6PFF0 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.82□□□□□ -0.52
Scaf4Q6PFF0 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.82□□□□□ -0.52
Scaf4Q6PFF0 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Scaf4Q6PFF0 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.82□□□□□ -0.52
Scaf4Q6PFF0 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.82□□□□□ -0.52
Scaf4Q6PFF0 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.82□□□□□ -0.52
Scaf4Q6PFF0 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scaf4Q6PFF0 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scaf4Q6PFF0 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Scaf4Q6PFF0 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.82□□□□□ -0.52
Scaf4Q6PFF0 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scaf4Q6PFF0 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scaf4Q6PFF0 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scaf4Q6PFF0 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scaf4Q6PFF0 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.82□□□□□ -0.52
Scaf4Q6PFF0 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scaf4Q6PFF0 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms