Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rad54bQ6PFE3 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 Gm23931-201ENSMUST00000103842 109 ntBASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 Gm43133-201ENSMUST00000197472 463 ntBASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 Gm5950-201ENSMUST00000213337 772 ntBASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rad54bQ6PFE3 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rad54bQ6PFE3 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rad54bQ6PFE3 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rad54bQ6PFE3 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rad54bQ6PFE3 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rad54bQ6PFE3 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rad54bQ6PFE3 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Rad54bQ6PFE3 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.08□□□□□ -0.48
Rad54bQ6PFE3 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.08□□□□□ -0.48
Rad54bQ6PFE3 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Rad54bQ6PFE3 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rad54bQ6PFE3 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rad54bQ6PFE3 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.08□□□□□ -0.48
Rad54bQ6PFE3 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rad54bQ6PFE3 Gm11424-201ENSMUST00000121929 829 ntBASIC12.08□□□□□ -0.48
Rad54bQ6PFE3 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.08□□□□□ -0.48
Rad54bQ6PFE3 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.08□□□□□ -0.48
Rad54bQ6PFE3 Mospd4-201ENSMUST00000180618 576 ntBASIC12.08□□□□□ -0.48
Rad54bQ6PFE3 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.08□□□□□ -0.48
Rad54bQ6PFE3 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.08□□□□□ -0.48
Rad54bQ6PFE3 Gm18893-201ENSMUST00000198416 943 ntBASIC12.08□□□□□ -0.48
Rad54bQ6PFE3 Gm43002-201ENSMUST00000200310 155 ntBASIC12.08□□□□□ -0.48
Rad54bQ6PFE3 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Rad54bQ6PFE3 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Rad54bQ6PFE3 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Rad54bQ6PFE3 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Rad54bQ6PFE3 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rad54bQ6PFE3 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Rad54bQ6PFE3 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Rad54bQ6PFE3 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rad54bQ6PFE3 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Rad54bQ6PFE3 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.08□□□□□ -0.48
Rad54bQ6PFE3 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rad54bQ6PFE3 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rad54bQ6PFE3 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rad54bQ6PFE3 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rad54bQ6PFE3 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Rad54bQ6PFE3 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.07□□□□□ -0.48
Rad54bQ6PFE3 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rad54bQ6PFE3 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Rad54bQ6PFE3 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rad54bQ6PFE3 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rad54bQ6PFE3 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rad54bQ6PFE3 Gm25214-201ENSMUST00000104573 129 ntBASIC12.07□□□□□ -0.48
Rad54bQ6PFE3 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rad54bQ6PFE3 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rad54bQ6PFE3 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rad54bQ6PFE3 Gm11531-201ENSMUST00000117614 555 ntBASIC12.07□□□□□ -0.48
Rad54bQ6PFE3 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.07□□□□□ -0.48
Rad54bQ6PFE3 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms