Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Nup98Q6PFD9 Gm45592-201ENSMUST00000209605 1043 ntBASIC13.93□□□□□ -0.18
Nup98Q6PFD9 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC13.93□□□□□ -0.18
Nup98Q6PFD9 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC13.93□□□□□ -0.18
Nup98Q6PFD9 Gm18065-201ENSMUST00000221395 526 ntBASIC13.93□□□□□ -0.18
Nup98Q6PFD9 Prrxl1-205ENSMUST00000228878 723 ntBASIC13.93□□□□□ -0.18
Nup98Q6PFD9 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup98Q6PFD9 Gm9415-201ENSMUST00000200462 1321 ntBASIC13.93□□□□□ -0.18
Nup98Q6PFD9 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nup98Q6PFD9 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup98Q6PFD9 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup98Q6PFD9 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup98Q6PFD9 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.93□□□□□ -0.18
Nup98Q6PFD9 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup98Q6PFD9 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup98Q6PFD9 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup98Q6PFD9 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup98Q6PFD9 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup98Q6PFD9 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup98Q6PFD9 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup98Q6PFD9 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Nup98Q6PFD9 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nup98Q6PFD9 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC13.92□□□□□ -0.18
Nup98Q6PFD9 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nup98Q6PFD9 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nup98Q6PFD9 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC13.92□□□□□ -0.18
Nup98Q6PFD9 Gm18968-201ENSMUST00000221319 862 ntBASIC13.92□□□□□ -0.18
Nup98Q6PFD9 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC13.92□□□□□ -0.18
Nup98Q6PFD9 AC159002.1-201ENSMUST00000226714 924 ntBASIC13.92□□□□□ -0.18
Nup98Q6PFD9 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Nup98Q6PFD9 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Nup98Q6PFD9 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nup98Q6PFD9 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nup98Q6PFD9 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Nup98Q6PFD9 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Nup98Q6PFD9 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nup98Q6PFD9 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nup98Q6PFD9 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nup98Q6PFD9 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nup98Q6PFD9 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC13.92□□□□□ -0.18
Nup98Q6PFD9 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nup98Q6PFD9 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nup98Q6PFD9 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nup98Q6PFD9 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nup98Q6PFD9 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC13.92□□□□□ -0.18
Nup98Q6PFD9 AC165351.1-201ENSMUST00000219078 2020 ntBASIC13.92□□□□□ -0.18
Nup98Q6PFD9 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Nup98Q6PFD9 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nup98Q6PFD9 Gm15528-201ENSMUST00000117821 864 ntBASIC13.92□□□□□ -0.18
Nup98Q6PFD9 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC13.92□□□□□ -0.18
Nup98Q6PFD9 Gm25492-201ENSMUST00000157383 129 ntBASIC13.92□□□□□ -0.18
Nup98Q6PFD9 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC13.92□□□□□ -0.18
Nup98Q6PFD9 Gm17709-201ENSMUST00000174536 1096 ntBASIC13.92□□□□□ -0.18
Nup98Q6PFD9 Gm7741-201ENSMUST00000181445 989 ntBASIC13.92□□□□□ -0.18
Nup98Q6PFD9 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC13.92□□□□□ -0.18
Nup98Q6PFD9 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nup98Q6PFD9 Gm39288-201ENSMUST00000210554 446 ntBASIC13.92□□□□□ -0.18
Nup98Q6PFD9 AC114645.1-201ENSMUST00000215831 187 ntBASIC13.92□□□□□ -0.18
Nup98Q6PFD9 AC174797.2-202ENSMUST00000225729 568 ntBASIC13.92□□□□□ -0.18
Nup98Q6PFD9 AC154589.2-201ENSMUST00000228847 251 ntBASIC13.92□□□□□ -0.18
Nup98Q6PFD9 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nup98Q6PFD9 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Nup98Q6PFD9 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Nup98Q6PFD9 Gm23680-201ENSMUST00000083162 164 ntBASIC13.92□□□□□ -0.18
Nup98Q6PFD9 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nup98Q6PFD9 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nup98Q6PFD9 Gm6655-201ENSMUST00000201932 1309 ntBASIC13.92□□□□□ -0.18
Nup98Q6PFD9 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nup98Q6PFD9 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Nup98Q6PFD9 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nup98Q6PFD9 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup98Q6PFD9 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nup98Q6PFD9 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup98Q6PFD9 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Nup98Q6PFD9 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Nup98Q6PFD9 Gm24398-201ENSMUST00000157870 109 ntBASIC13.91□□□□□ -0.18
Nup98Q6PFD9 Gm23218-201ENSMUST00000158124 276 ntBASIC13.91□□□□□ -0.18
Nup98Q6PFD9 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC13.91□□□□□ -0.18
Nup98Q6PFD9 Gm45856-201ENSMUST00000212752 416 ntBASIC13.91□□□□□ -0.18
Nup98Q6PFD9 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC13.91□□□□□ -0.18
Nup98Q6PFD9 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup98Q6PFD9 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Nup98Q6PFD9 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Nup98Q6PFD9 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup98Q6PFD9 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup98Q6PFD9 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nup98Q6PFD9 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nup98Q6PFD9 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup98Q6PFD9 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup98Q6PFD9 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup98Q6PFD9 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup98Q6PFD9 Gm18294-201ENSMUST00000176980 1748 ntBASIC13.91□□□□□ -0.18
Nup98Q6PFD9 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup98Q6PFD9 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nup98Q6PFD9 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup98Q6PFD9 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nup98Q6PFD9 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nup98Q6PFD9 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nup98Q6PFD9 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Nup98Q6PFD9 Gm4294-201ENSMUST00000105169 614 ntBASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms