Protein–RNA interactions for Protein: Q6PEM8

Slc46a1, Proton-coupled folate transporter, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a1Q6PEM8 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
Slc46a1Q6PEM8 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Slc46a1Q6PEM8 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Gm23949-201ENSMUST00000104027 127 ntBASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Gm12176-201ENSMUST00000121420 875 ntBASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Gm5616-201ENSMUST00000165252 384 ntBASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Gm20426-201ENSMUST00000173657 440 ntBASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Gm8741-201ENSMUST00000174736 384 ntBASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Gm37986-201ENSMUST00000193285 383 ntBASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Gm43962-201ENSMUST00000203898 190 ntBASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Gm44124-201ENSMUST00000204159 472 ntBASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Slc46a1Q6PEM8 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Slc46a1Q6PEM8 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.63□□□□□ -0.71
Slc46a1Q6PEM8 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Slc46a1Q6PEM8 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Slc46a1Q6PEM8 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Slc46a1Q6PEM8 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Slc46a1Q6PEM8 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC10.63□□□□□ -0.71
Slc46a1Q6PEM8 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.63□□□□□ -0.71
Slc46a1Q6PEM8 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Slc46a1Q6PEM8 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.63□□□□□ -0.71
Slc46a1Q6PEM8 Gm13615-201ENSMUST00000120242 1612 ntBASIC10.63□□□□□ -0.71
Slc46a1Q6PEM8 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Slc46a1Q6PEM8 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC10.63□□□□□ -0.71
Slc46a1Q6PEM8 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Slc46a1Q6PEM8 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Slc46a1Q6PEM8 Gm6039-201ENSMUST00000121667 1250 ntBASIC10.63□□□□□ -0.71
Slc46a1Q6PEM8 Gm14760-201ENSMUST00000121831 999 ntBASIC10.63□□□□□ -0.71
Slc46a1Q6PEM8 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Slc46a1Q6PEM8 Gm5732-201ENSMUST00000182596 1007 ntBASIC10.63□□□□□ -0.71
Slc46a1Q6PEM8 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Slc46a1Q6PEM8 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC10.63□□□□□ -0.71
Slc46a1Q6PEM8 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Slc46a1Q6PEM8 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Slc46a1Q6PEM8 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Slc46a1Q6PEM8 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Slc46a1Q6PEM8 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.63□□□□□ -0.71
Slc46a1Q6PEM8 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.63□□□□□ -0.71
Slc46a1Q6PEM8 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Slc46a1Q6PEM8 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Slc46a1Q6PEM8 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Slc46a1Q6PEM8 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Slc46a1Q6PEM8 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Slc46a1Q6PEM8 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Slc46a1Q6PEM8 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Slc46a1Q6PEM8 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms