Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.56□□□□□ -0.4
Ccdc85bQ6PDY0 Gm22920-201ENSMUST00000102175 109 ntBASIC12.56□□□□□ -0.4
Ccdc85bQ6PDY0 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc85bQ6PDY0 Gm16166-201ENSMUST00000118291 787 ntBASIC12.56□□□□□ -0.4
Ccdc85bQ6PDY0 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.56□□□□□ -0.4
Ccdc85bQ6PDY0 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC12.56□□□□□ -0.4
Ccdc85bQ6PDY0 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC12.56□□□□□ -0.4
Ccdc85bQ6PDY0 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc85bQ6PDY0 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc85bQ6PDY0 Gm9135-201ENSMUST00000182963 990 ntBASIC12.56□□□□□ -0.4
Ccdc85bQ6PDY0 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.56□□□□□ -0.4
Ccdc85bQ6PDY0 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ccdc85bQ6PDY0 Gm45410-201ENSMUST00000211331 1093 ntBASIC12.56□□□□□ -0.4
Ccdc85bQ6PDY0 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.56□□□□□ -0.4
Ccdc85bQ6PDY0 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.56□□□□□ -0.4
Ccdc85bQ6PDY0 Gm14005-208ENSMUST00000223654 681 ntBASIC12.56□□□□□ -0.4
Ccdc85bQ6PDY0 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc85bQ6PDY0 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc85bQ6PDY0 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc85bQ6PDY0 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc85bQ6PDY0 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc85bQ6PDY0 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.56□□□□□ -0.4
Ccdc85bQ6PDY0 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc85bQ6PDY0 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.56□□□□□ -0.4
Ccdc85bQ6PDY0 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ccdc85bQ6PDY0 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc85bQ6PDY0 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc85bQ6PDY0 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc85bQ6PDY0 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc85bQ6PDY0 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc85bQ6PDY0 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc85bQ6PDY0 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc85bQ6PDY0 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 Mir874-201ENSMUST00000104769 76 ntBASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 Gm14193-201ENSMUST00000105067 153 ntBASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 Gm12030-201ENSMUST00000121917 223 ntBASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 Gm22146-201ENSMUST00000157397 288 ntBASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 Gm9022-201ENSMUST00000182482 992 ntBASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 Mir6407-201ENSMUST00000184510 101 ntBASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 Arhgef33-210ENSMUST00000225548 456 ntBASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc85bQ6PDY0 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc85bQ6PDY0 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccdc85bQ6PDY0 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ccdc85bQ6PDY0 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc85bQ6PDY0 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc85bQ6PDY0 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc85bQ6PDY0 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Ccdc85bQ6PDY0 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc85bQ6PDY0 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc85bQ6PDY0 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc85bQ6PDY0 Gm5434-202ENSMUST00000222384 1451 ntBASIC12.54□□□□□ -0.4
Ccdc85bQ6PDY0 Gm5434-201ENSMUST00000071825 1451 ntBASIC12.54□□□□□ -0.4
Ccdc85bQ6PDY0 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc85bQ6PDY0 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccdc85bQ6PDY0 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ccdc85bQ6PDY0 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc85bQ6PDY0 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
Ccdc85bQ6PDY0 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc85bQ6PDY0 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC12.54□□□□□ -0.4
Ccdc85bQ6PDY0 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms