Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Gm45856-201ENSMUST00000212752 416 ntBASIC15.4■□□□□ 0.06
Chd4Q6PDQ2 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Chd4Q6PDQ2 Gm10263-201ENSMUST00000085163 300 ntBASIC15.4■□□□□ 0.06
Chd4Q6PDQ2 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Chd4Q6PDQ2 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd4Q6PDQ2 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd4Q6PDQ2 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chd4Q6PDQ2 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd4Q6PDQ2 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd4Q6PDQ2 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC15.4■□□□□ 0.06
Chd4Q6PDQ2 AC122840.1-201ENSMUST00000220915 3334 ntBASIC15.4■□□□□ 0.06
Chd4Q6PDQ2 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd4Q6PDQ2 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd4Q6PDQ2 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd4Q6PDQ2 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd4Q6PDQ2 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd4Q6PDQ2 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd4Q6PDQ2 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd4Q6PDQ2 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Chd4Q6PDQ2 Gm25063-201ENSMUST00000104666 94 ntBASIC15.39■□□□□ 0.05
Chd4Q6PDQ2 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Chd4Q6PDQ2 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC15.39■□□□□ 0.05
Chd4Q6PDQ2 Gm44323-201ENSMUST00000198689 129 ntBASIC15.39■□□□□ 0.05
Chd4Q6PDQ2 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Chd4Q6PDQ2 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC15.39■□□□□ 0.05
Chd4Q6PDQ2 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC15.39■□□□□ 0.05
Chd4Q6PDQ2 Gm19091-201ENSMUST00000208120 978 ntBASIC15.39■□□□□ 0.05
Chd4Q6PDQ2 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC15.39■□□□□ 0.05
Chd4Q6PDQ2 AC154184.3-201ENSMUST00000225620 1090 ntBASIC15.39■□□□□ 0.05
Chd4Q6PDQ2 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd4Q6PDQ2 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd4Q6PDQ2 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Chd4Q6PDQ2 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd4Q6PDQ2 Gm38194-201ENSMUST00000194529 2211 ntBASIC15.39■□□□□ 0.05
Chd4Q6PDQ2 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd4Q6PDQ2 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd4Q6PDQ2 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd4Q6PDQ2 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC15.39■□□□□ 0.05
Chd4Q6PDQ2 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Chd4Q6PDQ2 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd4Q6PDQ2 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd4Q6PDQ2 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Chd4Q6PDQ2 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd4Q6PDQ2 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Chd4Q6PDQ2 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd4Q6PDQ2 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd4Q6PDQ2 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd4Q6PDQ2 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC15.39■□□□□ 0.05
Chd4Q6PDQ2 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd4Q6PDQ2 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Chd4Q6PDQ2 Gm18514-201ENSMUST00000218980 436 ntBASIC15.39■□□□□ 0.05
Chd4Q6PDQ2 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Chd4Q6PDQ2 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd4Q6PDQ2 Mir483-201ENSMUST00000093631 73 ntBASIC15.39■□□□□ 0.05
Chd4Q6PDQ2 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd4Q6PDQ2 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Chd4Q6PDQ2 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Chd4Q6PDQ2 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC15.38■□□□□ 0.05
Chd4Q6PDQ2 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Chd4Q6PDQ2 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Chd4Q6PDQ2 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
Chd4Q6PDQ2 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd4Q6PDQ2 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Chd4Q6PDQ2 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Chd4Q6PDQ2 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC15.38■□□□□ 0.05
Chd4Q6PDQ2 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd4Q6PDQ2 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd4Q6PDQ2 Gm27177-202ENSMUST00000183514 2703 ntBASIC15.38■□□□□ 0.05
Chd4Q6PDQ2 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Chd4Q6PDQ2 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd4Q6PDQ2 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd4Q6PDQ2 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd4Q6PDQ2 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Chd4Q6PDQ2 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Chd4Q6PDQ2 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Chd4Q6PDQ2 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC15.38■□□□□ 0.05
Chd4Q6PDQ2 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC15.38■□□□□ 0.05
Chd4Q6PDQ2 Gm24992-201ENSMUST00000157412 130 ntBASIC15.38■□□□□ 0.05
Chd4Q6PDQ2 Gm30946-201ENSMUST00000198288 724 ntBASIC15.38■□□□□ 0.05
Chd4Q6PDQ2 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC15.38■□□□□ 0.05
Chd4Q6PDQ2 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Chd4Q6PDQ2 CT030653.1-201ENSMUST00000224382 1279 ntBASIC15.38■□□□□ 0.05
Chd4Q6PDQ2 AC154176.1-201ENSMUST00000225897 220 ntBASIC15.38■□□□□ 0.05
Chd4Q6PDQ2 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Chd4Q6PDQ2 Gm43760-201ENSMUST00000202120 3015 ntBASIC15.38■□□□□ 0.05
Chd4Q6PDQ2 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Chd4Q6PDQ2 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd4Q6PDQ2 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd4Q6PDQ2 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd4Q6PDQ2 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC15.38■□□□□ 0.05
Chd4Q6PDQ2 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd4Q6PDQ2 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Chd4Q6PDQ2 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd4Q6PDQ2 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd4Q6PDQ2 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.38■□□□□ 0.05
Chd4Q6PDQ2 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd4Q6PDQ2 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
Chd4Q6PDQ2 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd4Q6PDQ2 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chd4Q6PDQ2 Gm4294-201ENSMUST00000105169 614 ntBASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms