Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Ctr9Q62018 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ctr9Q62018 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ctr9Q62018 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ctr9Q62018 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctr9Q62018 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ctr9Q62018 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ctr9Q62018 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC14.19□□□□□ -0.14
Ctr9Q62018 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ctr9Q62018 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC14.19□□□□□ -0.14
Ctr9Q62018 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctr9Q62018 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctr9Q62018 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctr9Q62018 Gm38376-201ENSMUST00000195493 2253 ntBASIC14.19□□□□□ -0.14
Ctr9Q62018 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctr9Q62018 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC14.19□□□□□ -0.14
Ctr9Q62018 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC14.19□□□□□ -0.14
Ctr9Q62018 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctr9Q62018 H2-Q3-201ENSMUST00000172583 608 ntBASIC14.19□□□□□ -0.14
Ctr9Q62018 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC14.19□□□□□ -0.14
Ctr9Q62018 Gm43184-201ENSMUST00000197247 542 ntBASIC14.19□□□□□ -0.14
Ctr9Q62018 AC133602.1-201ENSMUST00000227510 509 ntBASIC14.19□□□□□ -0.14
Ctr9Q62018 AC121960.1-201ENSMUST00000227982 564 ntBASIC14.19□□□□□ -0.14
Ctr9Q62018 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctr9Q62018 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC14.19□□□□□ -0.14
Ctr9Q62018 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ctr9Q62018 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ctr9Q62018 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ctr9Q62018 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ctr9Q62018 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctr9Q62018 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctr9Q62018 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctr9Q62018 AC159308.2-201ENSMUST00000213592 2325 ntBASIC14.19□□□□□ -0.14
Ctr9Q62018 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctr9Q62018 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctr9Q62018 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Ctr9Q62018 CT025678.1-201ENSMUST00000214795 2972 ntBASIC14.19□□□□□ -0.14
Ctr9Q62018 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ctr9Q62018 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctr9Q62018 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctr9Q62018 AC173482.6-201ENSMUST00000225889 1741 ntBASIC14.18□□□□□ -0.14
Ctr9Q62018 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC14.18□□□□□ -0.14
Ctr9Q62018 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctr9Q62018 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctr9Q62018 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ctr9Q62018 Gm5053-201ENSMUST00000208361 1678 ntBASIC14.18□□□□□ -0.14
Ctr9Q62018 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ctr9Q62018 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ctr9Q62018 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ctr9Q62018 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctr9Q62018 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctr9Q62018 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctr9Q62018 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC14.18□□□□□ -0.14
Ctr9Q62018 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC14.18□□□□□ -0.14
Ctr9Q62018 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ctr9Q62018 Gm25881-201ENSMUST00000157783 103 ntBASIC14.18□□□□□ -0.14
Ctr9Q62018 Gm42629-201ENSMUST00000199063 1102 ntBASIC14.18□□□□□ -0.14
Ctr9Q62018 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC14.18□□□□□ -0.14
Ctr9Q62018 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ctr9Q62018 Gm5369-201ENSMUST00000217499 588 ntBASIC14.18□□□□□ -0.14
Ctr9Q62018 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Ctr9Q62018 Gm807-202ENSMUST00000224929 408 ntBASIC14.18□□□□□ -0.14
Ctr9Q62018 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctr9Q62018 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ctr9Q62018 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctr9Q62018 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ctr9Q62018 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctr9Q62018 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctr9Q62018 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ctr9Q62018 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Ctr9Q62018 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctr9Q62018 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ctr9Q62018 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctr9Q62018 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctr9Q62018 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ctr9Q62018 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctr9Q62018 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctr9Q62018 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ctr9Q62018 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctr9Q62018 Gm43267-201ENSMUST00000199664 1796 ntBASIC14.17□□□□□ -0.14
Ctr9Q62018 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctr9Q62018 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctr9Q62018 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctr9Q62018 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ctr9Q62018 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctr9Q62018 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctr9Q62018 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctr9Q62018 Map1b-203ENSMUST00000223725 2669 ntBASIC14.17□□□□□ -0.14
Ctr9Q62018 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctr9Q62018 Gm12196-201ENSMUST00000120954 262 ntBASIC14.17□□□□□ -0.14
Ctr9Q62018 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Ctr9Q62018 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC14.17□□□□□ -0.14
Ctr9Q62018 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ctr9Q62018 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ctr9Q62018 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC14.17□□□□□ -0.14
Ctr9Q62018 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ctr9Q62018 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC14.17□□□□□ -0.14
Ctr9Q62018 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC14.17□□□□□ -0.14
Ctr9Q62018 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctr9Q62018 Mir219a-1-201ENSMUST00000083621 110 ntBASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms