Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC15.77■□□□□ 0.11
Gli3Q61602 Nsmce2-203ENSMUST00000227173 1122 ntBASIC15.77■□□□□ 0.11
Gli3Q61602 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Gli3Q61602 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Gli3Q61602 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Gli3Q61602 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Gli3Q61602 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Gli3Q61602 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Gli3Q61602 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Gli3Q61602 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Gli3Q61602 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Gli3Q61602 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Gli3Q61602 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Gli3Q61602 Gm44740-201ENSMUST00000205603 1614 ntBASIC15.76■□□□□ 0.11
Gli3Q61602 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Gli3Q61602 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Gli3Q61602 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Gli3Q61602 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Gli3Q61602 Cst10-202ENSMUST00000109938 729 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Gli3Q61602 Gm14176-201ENSMUST00000121302 477 ntBASIC15.76■□□□□ 0.11
Gli3Q61602 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Gli3Q61602 Gm13799-201ENSMUST00000138883 838 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Gli3Q61602 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC15.76■□□□□ 0.11
Gli3Q61602 Gm23432-201ENSMUST00000157181 131 ntBASIC15.76■□□□□ 0.11
Gli3Q61602 Gm6114-201ENSMUST00000182472 968 ntBASIC15.76■□□□□ 0.11
Gli3Q61602 Gm5291-201ENSMUST00000201965 899 ntBASIC15.76■□□□□ 0.11
Gli3Q61602 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC15.76■□□□□ 0.11
Gli3Q61602 AC241616.1-201ENSMUST00000213741 166 ntBASIC15.76■□□□□ 0.11
Gli3Q61602 AC124356.1-201ENSMUST00000221469 698 ntBASIC15.76■□□□□ 0.11
Gli3Q61602 AC134913.2-201ENSMUST00000225017 771 ntBASIC15.76■□□□□ 0.11
Gli3Q61602 Cst10-201ENSMUST00000047008 804 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Gli3Q61602 Gm9701-201ENSMUST00000077976 427 ntBASIC15.76■□□□□ 0.11
Gli3Q61602 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC15.76■□□□□ 0.11
Gli3Q61602 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC15.76■□□□□ 0.11
Gli3Q61602 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Gli3Q61602 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Gli3Q61602 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Gli3Q61602 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Gli3Q61602 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Gli3Q61602 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Gli3Q61602 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Gli3Q61602 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Gli3Q61602 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Gli3Q61602 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC15.76■□□□□ 0.11
Gli3Q61602 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC15.76■□□□□ 0.11
Gli3Q61602 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gli3Q61602 Gm6560-201ENSMUST00000198588 1591 ntBASIC15.75■□□□□ 0.11
Gli3Q61602 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gli3Q61602 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gli3Q61602 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gli3Q61602 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gli3Q61602 Gm6441-201ENSMUST00000120983 696 ntBASIC15.75■□□□□ 0.11
Gli3Q61602 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC15.75■□□□□ 0.11
Gli3Q61602 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Gli3Q61602 Pdc-201ENSMUST00000165062 1246 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Gli3Q61602 Gm17225-201ENSMUST00000172051 497 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Gli3Q61602 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Gli3Q61602 Gm27316-201ENSMUST00000184884 277 ntBASIC15.75■□□□□ 0.11
Gli3Q61602 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC15.75■□□□□ 0.11
Gli3Q61602 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Gli3Q61602 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC15.75■□□□□ 0.11
Gli3Q61602 CT571271.1-201ENSMUST00000227071 670 ntBASIC15.75■□□□□ 0.11
Gli3Q61602 Gm5278-201ENSMUST00000055957 552 ntBASIC15.75■□□□□ 0.11
Gli3Q61602 Gm25580-201ENSMUST00000083409 327 ntBASIC15.75■□□□□ 0.11
Gli3Q61602 Gm44942-201ENSMUST00000096093 2072 ntBASIC15.75■□□□□ 0.11
Gli3Q61602 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Gli3Q61602 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC15.75■□□□□ 0.11
Gli3Q61602 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gli3Q61602 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gli3Q61602 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gli3Q61602 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gli3Q61602 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gli3Q61602 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gli3Q61602 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gli3Q61602 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gli3Q61602 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Gli3Q61602 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gli3Q61602 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gli3Q61602 Klk1b26-201ENSMUST00000048945 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gli3Q61602 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Gli3Q61602 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gli3Q61602 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gli3Q61602 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gli3Q61602 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gli3Q61602 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Gli3Q61602 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC15.75■□□□□ 0.11
Gli3Q61602 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Gli3Q61602 Gm45266-201ENSMUST00000210111 2173 ntBASIC15.75■□□□□ 0.11
Gli3Q61602 Gm12745-201ENSMUST00000121767 214 ntBASIC15.75■□□□□ 0.11
Gli3Q61602 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC15.75■□□□□ 0.11
Gli3Q61602 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Gli3Q61602 Gm7805-201ENSMUST00000154348 448 ntBASIC15.75■□□□□ 0.11
Gli3Q61602 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC15.75■□□□□ 0.11
Gli3Q61602 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC15.75■□□□□ 0.11
Gli3Q61602 Gm5738-201ENSMUST00000206016 779 ntBASIC15.75■□□□□ 0.11
Gli3Q61602 Gm44917-201ENSMUST00000208798 520 ntBASIC15.75■□□□□ 0.11
Gli3Q61602 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gli3Q61602 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC15.75■□□□□ 0.11
Gli3Q61602 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gli3Q61602 Gm5507-201ENSMUST00000091897 1008 ntBASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms