Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Foxc1Q61572 Gm8706-201ENSMUST00000197372 1491 ntBASIC9.17□□□□□ -0.94
Foxc1Q61572 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Foxc1Q61572 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Foxc1Q61572 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Foxc1Q61572 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC9.17□□□□□ -0.94
Foxc1Q61572 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC9.17□□□□□ -0.94
Foxc1Q61572 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Foxc1Q61572 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC9.17□□□□□ -0.94
Foxc1Q61572 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Foxc1Q61572 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Foxc1Q61572 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC9.17□□□□□ -0.94
Foxc1Q61572 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Foxc1Q61572 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Foxc1Q61572 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC9.17□□□□□ -0.94
Foxc1Q61572 Gm12241-201ENSMUST00000118330 726 ntBASIC9.17□□□□□ -0.94
Foxc1Q61572 Gm14921-201ENSMUST00000118643 908 ntBASIC9.17□□□□□ -0.94
Foxc1Q61572 Gm9164-201ENSMUST00000118700 1014 ntBASIC9.17□□□□□ -0.94
Foxc1Q61572 Gm14704-201ENSMUST00000120300 874 ntBASIC9.17□□□□□ -0.94
Foxc1Q61572 Gm13350-201ENSMUST00000120519 479 ntBASIC9.17□□□□□ -0.94
Foxc1Q61572 Gm12329-201ENSMUST00000120829 1007 ntBASIC9.17□□□□□ -0.94
Foxc1Q61572 Gm13342-201ENSMUST00000121055 207 ntBASIC9.17□□□□□ -0.94
Foxc1Q61572 Gm15530-201ENSMUST00000122206 555 ntBASIC9.17□□□□□ -0.94
Foxc1Q61572 Gm12363-201ENSMUST00000122250 668 ntBASIC9.17□□□□□ -0.94
Foxc1Q61572 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Foxc1Q61572 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC9.17□□□□□ -0.94
Foxc1Q61572 Gm15133-201ENSMUST00000139019 843 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Foxc1Q61572 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC9.17□□□□□ -0.94
Foxc1Q61572 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Foxc1Q61572 Gm4540-201ENSMUST00000170669 429 ntBASIC9.17□□□□□ -0.94
Foxc1Q61572 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC9.17□□□□□ -0.94
Foxc1Q61572 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Foxc1Q61572 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC9.17□□□□□ -0.94
Foxc1Q61572 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC9.17□□□□□ -0.94
Foxc1Q61572 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Foxc1Q61572 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Foxc1Q61572 Gm18382-201ENSMUST00000194394 582 ntBASIC9.17□□□□□ -0.94
Foxc1Q61572 Gm18985-201ENSMUST00000196472 1079 ntBASIC9.17□□□□□ -0.94
Foxc1Q61572 Gm43138-201ENSMUST00000199123 708 ntBASIC9.17□□□□□ -0.94
Foxc1Q61572 Gm43821-201ENSMUST00000199198 729 ntTSL 3 BASIC9.17□□□□□ -0.94
Foxc1Q61572 Gm18330-201ENSMUST00000199246 547 ntBASIC9.17□□□□□ -0.94
Foxc1Q61572 Gm7238-201ENSMUST00000206467 973 ntBASIC9.17□□□□□ -0.94
Foxc1Q61572 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Foxc1Q61572 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC9.17□□□□□ -0.94
Foxc1Q61572 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Foxc1Q61572 Gm9368-201ENSMUST00000219348 831 ntBASIC9.17□□□□□ -0.94
Foxc1Q61572 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Foxc1Q61572 AC102352.1-201ENSMUST00000224187 582 ntBASIC9.17□□□□□ -0.94
Foxc1Q61572 AC022775.2-201ENSMUST00000227885 646 ntBASIC9.17□□□□□ -0.94
Foxc1Q61572 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Foxc1Q61572 Wfdc12-201ENSMUST00000051272 775 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Foxc1Q61572 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Foxc1Q61572 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC9.17□□□□□ -0.94
Foxc1Q61572 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Foxc1Q61572 n-R5s195-201ENSMUST00000082891 119 ntBASIC9.17□□□□□ -0.94
Foxc1Q61572 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Foxc1Q61572 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Foxc1Q61572 CT573086.2-201ENSMUST00000227277 4992 ntBASIC9.17□□□□□ -0.94
Foxc1Q61572 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Foxc1Q61572 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Foxc1Q61572 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Foxc1Q61572 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Foxc1Q61572 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Foxc1Q61572 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Foxc1Q61572 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Foxc1Q61572 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Foxc1Q61572 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Foxc1Q61572 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Foxc1Q61572 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Foxc1Q61572 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC9.17□□□□□ -0.94
Foxc1Q61572 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Foxc1Q61572 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Foxc1Q61572 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Foxc1Q61572 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Foxc1Q61572 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Foxc1Q61572 Gm8798-201ENSMUST00000211877 1661 ntBASIC9.16□□□□□ -0.94
Foxc1Q61572 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Foxc1Q61572 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Foxc1Q61572 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Foxc1Q61572 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Foxc1Q61572 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Foxc1Q61572 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Foxc1Q61572 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Foxc1Q61572 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Foxc1Q61572 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Foxc1Q61572 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Foxc1Q61572 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Foxc1Q61572 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC9.16□□□□□ -0.94
Foxc1Q61572 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC9.16□□□□□ -0.94
Foxc1Q61572 Phf7-206ENSMUST00000228437 1373 ntBASIC9.16□□□□□ -0.94
Foxc1Q61572 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Foxc1Q61572 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Foxc1Q61572 Gm43579-201ENSMUST00000202387 1307 ntBASIC9.16□□□□□ -0.94
Foxc1Q61572 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Foxc1Q61572 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Foxc1Q61572 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Foxc1Q61572 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Foxc1Q61572 Gm5530-201ENSMUST00000117185 985 ntBASIC9.16□□□□□ -0.94
Foxc1Q61572 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC9.16□□□□□ -0.94
Foxc1Q61572 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC9.16□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms