Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ecm1Q61508 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ecm1Q61508 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ecm1Q61508 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ecm1Q61508 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ecm1Q61508 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.25□□□□□ -0.29
Ecm1Q61508 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ecm1Q61508 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ecm1Q61508 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ecm1Q61508 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ecm1Q61508 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ecm1Q61508 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ecm1Q61508 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ecm1Q61508 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ecm1Q61508 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ecm1Q61508 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Ecm1Q61508 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ecm1Q61508 Gm29100-201ENSMUST00000187564 4410 ntBASIC13.24□□□□□ -0.29
Ecm1Q61508 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ecm1Q61508 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.24□□□□□ -0.29
Ecm1Q61508 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ecm1Q61508 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ecm1Q61508 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.24□□□□□ -0.29
Ecm1Q61508 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ecm1Q61508 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Ecm1Q61508 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ecm1Q61508 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Ecm1Q61508 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ecm1Q61508 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.24□□□□□ -0.29
Ecm1Q61508 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC13.24□□□□□ -0.29
Ecm1Q61508 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC13.24□□□□□ -0.29
Ecm1Q61508 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ecm1Q61508 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ecm1Q61508 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC13.24□□□□□ -0.29
Ecm1Q61508 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC13.24□□□□□ -0.29
Ecm1Q61508 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC13.24□□□□□ -0.29
Ecm1Q61508 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ecm1Q61508 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Ecm1Q61508 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ecm1Q61508 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ecm1Q61508 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ecm1Q61508 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ecm1Q61508 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ecm1Q61508 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.24□□□□□ -0.29
Ecm1Q61508 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ecm1Q61508 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ecm1Q61508 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ecm1Q61508 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ecm1Q61508 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Ecm1Q61508 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.24□□□□□ -0.29
Ecm1Q61508 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ecm1Q61508 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ecm1Q61508 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ecm1Q61508 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ecm1Q61508 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ecm1Q61508 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Ecm1Q61508 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ecm1Q61508 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ecm1Q61508 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ecm1Q61508 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ecm1Q61508 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.23□□□□□ -0.29
Ecm1Q61508 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ecm1Q61508 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ecm1Q61508 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ecm1Q61508 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ecm1Q61508 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ecm1Q61508 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ecm1Q61508 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ecm1Q61508 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ecm1Q61508 Gm15615-201ENSMUST00000118876 198 ntBASIC13.23□□□□□ -0.29
Ecm1Q61508 Gm11244-201ENSMUST00000121243 237 ntBASIC13.23□□□□□ -0.29
Ecm1Q61508 n-R5s84-201ENSMUST00000122591 109 ntBASIC13.23□□□□□ -0.29
Ecm1Q61508 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC13.23□□□□□ -0.29
Ecm1Q61508 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Ecm1Q61508 Gm26047-201ENSMUST00000157308 113 ntBASIC13.23□□□□□ -0.29
Ecm1Q61508 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.23□□□□□ -0.29
Ecm1Q61508 Gm29410-201ENSMUST00000188383 694 ntBASIC13.23□□□□□ -0.29
Ecm1Q61508 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.23□□□□□ -0.29
Ecm1Q61508 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC13.23□□□□□ -0.29
Ecm1Q61508 Gm26047-202ENSMUST00000198840 115 ntBASIC13.23□□□□□ -0.29
Ecm1Q61508 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC13.23□□□□□ -0.29
Ecm1Q61508 Gm3619-201ENSMUST00000219947 775 ntBASIC13.23□□□□□ -0.29
Ecm1Q61508 CT009536.2-201ENSMUST00000225370 665 ntBASIC13.23□□□□□ -0.29
Ecm1Q61508 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ecm1Q61508 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Ecm1Q61508 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ecm1Q61508 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ecm1Q61508 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ecm1Q61508 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ecm1Q61508 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ecm1Q61508 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Ecm1Q61508 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ecm1Q61508 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ecm1Q61508 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ecm1Q61508 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ecm1Q61508 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ecm1Q61508 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ecm1Q61508 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ecm1Q61508 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ecm1Q61508 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms