Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox17Q61473 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.23□□□□□ -0.61
Sox17Q61473 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox17Q61473 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox17Q61473 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox17Q61473 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox17Q61473 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox17Q61473 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sox17Q61473 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox17Q61473 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sox17Q61473 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox17Q61473 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox17Q61473 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox17Q61473 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox17Q61473 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox17Q61473 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Sox17Q61473 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox17Q61473 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox17Q61473 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox17Q61473 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Sox17Q61473 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox17Q61473 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sox17Q61473 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox17Q61473 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox17Q61473 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox17Q61473 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Sox17Q61473 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox17Q61473 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox17Q61473 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox17Q61473 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Sox17Q61473 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox17Q61473 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Sox17Q61473 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Sox17Q61473 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
Sox17Q61473 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox17Q61473 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox17Q61473 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox17Q61473 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox17Q61473 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox17Q61473 Gm12502-201ENSMUST00000120197 444 ntBASIC11.22□□□□□ -0.61
Sox17Q61473 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC11.22□□□□□ -0.61
Sox17Q61473 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
Sox17Q61473 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox17Q61473 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox17Q61473 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox17Q61473 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Sox17Q61473 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox17Q61473 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Sox17Q61473 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Sox17Q61473 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.22□□□□□ -0.61
Sox17Q61473 Gm45384-201ENSMUST00000210451 277 ntBASIC11.22□□□□□ -0.61
Sox17Q61473 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.22□□□□□ -0.61
Sox17Q61473 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox17Q61473 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Sox17Q61473 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox17Q61473 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox17Q61473 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox17Q61473 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox17Q61473 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox17Q61473 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Sox17Q61473 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.22□□□□□ -0.61
Sox17Q61473 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox17Q61473 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
Sox17Q61473 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox17Q61473 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.22□□□□□ -0.61
Sox17Q61473 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox17Q61473 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.22□□□□□ -0.61
Sox17Q61473 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox17Q61473 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox17Q61473 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox17Q61473 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Sox17Q61473 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox17Q61473 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sox17Q61473 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.21□□□□□ -0.61
Sox17Q61473 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Sox17Q61473 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.21□□□□□ -0.61
Sox17Q61473 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.21□□□□□ -0.61
Sox17Q61473 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox17Q61473 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Sox17Q61473 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox17Q61473 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Sox17Q61473 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Sox17Q61473 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.21□□□□□ -0.61
Sox17Q61473 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.21□□□□□ -0.61
Sox17Q61473 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sox17Q61473 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.21□□□□□ -0.61
Sox17Q61473 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox17Q61473 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.21□□□□□ -0.61
Sox17Q61473 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sox17Q61473 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.21□□□□□ -0.61
Sox17Q61473 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox17Q61473 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox17Q61473 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Sox17Q61473 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox17Q61473 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.21□□□□□ -0.61
Sox17Q61473 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox17Q61473 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Sox17Q61473 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.21□□□□□ -0.61
Sox17Q61473 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.21□□□□□ -0.61
Sox17Q61473 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms