Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col11a1Q61245 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Col11a1Q61245 Gm6024-201ENSMUST00000117850 1558 ntBASIC13.18□□□□□ -0.3
Col11a1Q61245 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col11a1Q61245 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col11a1Q61245 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col11a1Q61245 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col11a1Q61245 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col11a1Q61245 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Col11a1Q61245 Gm23255-201ENSMUST00000102244 110 ntBASIC13.18□□□□□ -0.3
Col11a1Q61245 Gm22937-201ENSMUST00000103954 131 ntBASIC13.18□□□□□ -0.3
Col11a1Q61245 Gm14034-201ENSMUST00000120147 551 ntBASIC13.18□□□□□ -0.3
Col11a1Q61245 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC13.18□□□□□ -0.3
Col11a1Q61245 Gm25677-201ENSMUST00000174983 72 ntBASIC13.18□□□□□ -0.3
Col11a1Q61245 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC13.18□□□□□ -0.3
Col11a1Q61245 Gm6644-201ENSMUST00000186507 951 ntBASIC13.18□□□□□ -0.3
Col11a1Q61245 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Col11a1Q61245 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col11a1Q61245 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Col11a1Q61245 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Col11a1Q61245 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Col11a1Q61245 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col11a1Q61245 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Col11a1Q61245 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col11a1Q61245 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Col11a1Q61245 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col11a1Q61245 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.17□□□□□ -0.3
Col11a1Q61245 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC13.17□□□□□ -0.3
Col11a1Q61245 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC13.17□□□□□ -0.3
Col11a1Q61245 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col11a1Q61245 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC13.17□□□□□ -0.3
Col11a1Q61245 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col11a1Q61245 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col11a1Q61245 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col11a1Q61245 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col11a1Q61245 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col11a1Q61245 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col11a1Q61245 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col11a1Q61245 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col11a1Q61245 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col11a1Q61245 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col11a1Q61245 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col11a1Q61245 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC13.17□□□□□ -0.3
Col11a1Q61245 Gm14234-201ENSMUST00000119539 845 ntBASIC13.17□□□□□ -0.3
Col11a1Q61245 Gm12129-201ENSMUST00000120104 1147 ntBASIC13.17□□□□□ -0.3
Col11a1Q61245 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC13.17□□□□□ -0.3
Col11a1Q61245 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC13.17□□□□□ -0.3
Col11a1Q61245 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC13.17□□□□□ -0.3
Col11a1Q61245 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Col11a1Q61245 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Col11a1Q61245 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col11a1Q61245 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC13.17□□□□□ -0.3
Col11a1Q61245 Gm7192-201ENSMUST00000210793 1137 ntBASIC13.17□□□□□ -0.3
Col11a1Q61245 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col11a1Q61245 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Col11a1Q61245 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col11a1Q61245 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Col11a1Q61245 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC13.17□□□□□ -0.3
Col11a1Q61245 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col11a1Q61245 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col11a1Q61245 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Col11a1Q61245 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col11a1Q61245 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col11a1Q61245 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.16□□□□□ -0.3
Col11a1Q61245 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col11a1Q61245 Gm5308-201ENSMUST00000196752 1354 ntBASIC13.16□□□□□ -0.3
Col11a1Q61245 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col11a1Q61245 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Col11a1Q61245 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col11a1Q61245 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Col11a1Q61245 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Col11a1Q61245 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col11a1Q61245 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Col11a1Q61245 Gm14497-201ENSMUST00000119537 580 ntBASIC13.16□□□□□ -0.3
Col11a1Q61245 Gm12461-201ENSMUST00000120231 1239 ntBASIC13.16□□□□□ -0.3
Col11a1Q61245 Gm3828-201ENSMUST00000121817 257 ntBASIC13.16□□□□□ -0.3
Col11a1Q61245 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col11a1Q61245 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC13.16□□□□□ -0.3
Col11a1Q61245 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col11a1Q61245 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC13.16□□□□□ -0.3
Col11a1Q61245 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Col11a1Q61245 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col11a1Q61245 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC13.16□□□□□ -0.3
Col11a1Q61245 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC13.16□□□□□ -0.3
Col11a1Q61245 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC13.16□□□□□ -0.3
Col11a1Q61245 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Col11a1Q61245 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC13.16□□□□□ -0.3
Col11a1Q61245 Gm8181-201ENSMUST00000062242 669 ntBASIC13.16□□□□□ -0.3
Col11a1Q61245 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col11a1Q61245 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Col11a1Q61245 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col11a1Q61245 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col11a1Q61245 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col11a1Q61245 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col11a1Q61245 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col11a1Q61245 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Col11a1Q61245 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Col11a1Q61245 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col11a1Q61245 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col11a1Q61245 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms