Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 n-R5s105-201ENSMUST00000178499 119 ntBASIC11.54□□□□□ -0.56
Col12a1Q60847 n-R5s149-201ENSMUST00000178520 119 ntBASIC11.54□□□□□ -0.56
Col12a1Q60847 n-R5s103-201ENSMUST00000178755 119 ntBASIC11.54□□□□□ -0.56
Col12a1Q60847 n-R5s123-201ENSMUST00000178804 119 ntBASIC11.54□□□□□ -0.56
Col12a1Q60847 n-R5s142-201ENSMUST00000178820 119 ntBASIC11.54□□□□□ -0.56
Col12a1Q60847 n-R5s144-201ENSMUST00000178859 119 ntBASIC11.54□□□□□ -0.56
Col12a1Q60847 n-R5s139-201ENSMUST00000178975 119 ntBASIC11.54□□□□□ -0.56
Col12a1Q60847 n-R5s134-201ENSMUST00000178983 119 ntBASIC11.54□□□□□ -0.56
Col12a1Q60847 n-R5s136-201ENSMUST00000179080 119 ntBASIC11.54□□□□□ -0.56
Col12a1Q60847 Gm25018-201ENSMUST00000179081 119 ntBASIC11.54□□□□□ -0.56
Col12a1Q60847 n-R5s104-201ENSMUST00000179107 119 ntBASIC11.54□□□□□ -0.56
Col12a1Q60847 n-R5s113-201ENSMUST00000179143 119 ntBASIC11.54□□□□□ -0.56
Col12a1Q60847 n-R5s133-201ENSMUST00000179275 119 ntBASIC11.54□□□□□ -0.56
Col12a1Q60847 n-R5s117-201ENSMUST00000179431 119 ntBASIC11.54□□□□□ -0.56
Col12a1Q60847 Gm25212-201ENSMUST00000179432 119 ntBASIC11.54□□□□□ -0.56
Col12a1Q60847 n-R5s138-201ENSMUST00000179476 119 ntBASIC11.54□□□□□ -0.56
Col12a1Q60847 n-R5s122-201ENSMUST00000179500 119 ntBASIC11.54□□□□□ -0.56
Col12a1Q60847 n-R5s143-201ENSMUST00000179542 119 ntBASIC11.54□□□□□ -0.56
Col12a1Q60847 Gm26443-201ENSMUST00000179610 110 ntBASIC11.54□□□□□ -0.56
Col12a1Q60847 n-R5s107-201ENSMUST00000179704 119 ntBASIC11.54□□□□□ -0.56
Col12a1Q60847 Gm26391-201ENSMUST00000179843 119 ntBASIC11.54□□□□□ -0.56
Col12a1Q60847 n-R5s110-201ENSMUST00000179995 119 ntBASIC11.54□□□□□ -0.56
Col12a1Q60847 n-R5s128-201ENSMUST00000180096 119 ntBASIC11.54□□□□□ -0.56
Col12a1Q60847 n-R5s124-201ENSMUST00000180334 119 ntBASIC11.54□□□□□ -0.56
Col12a1Q60847 Mir6934-201ENSMUST00000183965 62 ntBASIC11.54□□□□□ -0.56
Col12a1Q60847 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col12a1Q60847 Gm38103-201ENSMUST00000191707 864 ntBASIC11.54□□□□□ -0.56
Col12a1Q60847 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC11.54□□□□□ -0.56
Col12a1Q60847 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col12a1Q60847 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Col12a1Q60847 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Col12a1Q60847 Gm24089-201ENSMUST00000093696 109 ntBASIC11.54□□□□□ -0.56
Col12a1Q60847 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col12a1Q60847 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col12a1Q60847 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col12a1Q60847 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col12a1Q60847 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col12a1Q60847 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col12a1Q60847 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col12a1Q60847 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col12a1Q60847 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col12a1Q60847 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col12a1Q60847 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.53□□□□□ -0.56
Col12a1Q60847 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC11.53□□□□□ -0.56
Col12a1Q60847 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC11.53□□□□□ -0.56
Col12a1Q60847 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC11.53□□□□□ -0.56
Col12a1Q60847 Gm12946-201ENSMUST00000122969 519 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col12a1Q60847 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC11.53□□□□□ -0.56
Col12a1Q60847 Gm8824-201ENSMUST00000182962 990 ntBASIC11.53□□□□□ -0.56
Col12a1Q60847 Gm45060-201ENSMUST00000203293 593 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col12a1Q60847 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col12a1Q60847 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col12a1Q60847 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col12a1Q60847 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col12a1Q60847 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col12a1Q60847 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col12a1Q60847 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col12a1Q60847 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col12a1Q60847 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col12a1Q60847 Gm8226-201ENSMUST00000190511 798 ntBASIC11.53□□□□□ -0.56
Col12a1Q60847 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC11.53□□□□□ -0.56
Col12a1Q60847 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col12a1Q60847 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Col12a1Q60847 AC154477.1-201ENSMUST00000226515 773 ntBASIC11.53□□□□□ -0.56
Col12a1Q60847 AC137842.2-201ENSMUST00000227734 797 ntBASIC11.53□□□□□ -0.56
Col12a1Q60847 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Col12a1Q60847 Gm4978-201ENSMUST00000071565 801 ntBASIC11.53□□□□□ -0.56
Col12a1Q60847 Rps18-201ENSMUST00000008812 600 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col12a1Q60847 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col12a1Q60847 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.53□□□□□ -0.56
Col12a1Q60847 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Col12a1Q60847 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.53□□□□□ -0.56
Col12a1Q60847 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col12a1Q60847 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col12a1Q60847 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col12a1Q60847 Mir1249-201ENSMUST00000116791 98 ntBASIC11.53□□□□□ -0.56
Col12a1Q60847 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col12a1Q60847 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.53□□□□□ -0.56
Col12a1Q60847 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC11.53□□□□□ -0.56
Col12a1Q60847 Gm16547-201ENSMUST00000159474 293 ntBASIC11.53□□□□□ -0.56
Col12a1Q60847 Gm17221-201ENSMUST00000163909 481 ntBASIC11.53□□□□□ -0.56
Col12a1Q60847 Gm17073-201ENSMUST00000168069 556 ntBASIC11.53□□□□□ -0.56
Col12a1Q60847 Gm9372-201ENSMUST00000168454 430 ntBASIC11.53□□□□□ -0.56
Col12a1Q60847 Gm5982-201ENSMUST00000196234 512 ntBASIC11.53□□□□□ -0.56
Col12a1Q60847 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col12a1Q60847 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col12a1Q60847 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col12a1Q60847 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col12a1Q60847 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col12a1Q60847 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Col12a1Q60847 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.52□□□□□ -0.56
Col12a1Q60847 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.52□□□□□ -0.56
Col12a1Q60847 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.52□□□□□ -0.56
Col12a1Q60847 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Col12a1Q60847 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.56
Col12a1Q60847 Gm6216-201ENSMUST00000182390 687 ntBASIC11.52□□□□□ -0.56
Col12a1Q60847 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Col12a1Q60847 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Col12a1Q60847 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Col12a1Q60847 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms