Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5d-4Q5R1F6 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5d-4Q5R1F6 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5d-4Q5R1F6 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5d-4Q5R1F6 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5d-4Q5R1F6 Gm23270-201ENSMUST00000104055 131 ntBASIC10.32□□□□□ -0.76
Trav5d-4Q5R1F6 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5d-4Q5R1F6 Gm11222-201ENSMUST00000119005 738 ntBASIC10.32□□□□□ -0.76
Trav5d-4Q5R1F6 Gm15547-201ENSMUST00000122152 333 ntBASIC10.32□□□□□ -0.76
Trav5d-4Q5R1F6 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.32□□□□□ -0.76
Trav5d-4Q5R1F6 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC10.32□□□□□ -0.76
Trav5d-4Q5R1F6 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5d-4Q5R1F6 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Trav5d-4Q5R1F6 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5d-4Q5R1F6 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.32□□□□□ -0.76
Trav5d-4Q5R1F6 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5d-4Q5R1F6 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5d-4Q5R1F6 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5d-4Q5R1F6 Gm44711-201ENSMUST00000205414 1264 ntBASIC10.32□□□□□ -0.76
Trav5d-4Q5R1F6 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC10.32□□□□□ -0.76
Trav5d-4Q5R1F6 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5d-4Q5R1F6 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5d-4Q5R1F6 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5d-4Q5R1F6 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5d-4Q5R1F6 Gm10312-201ENSMUST00000078515 489 ntBASIC10.32□□□□□ -0.76
Trav5d-4Q5R1F6 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5d-4Q5R1F6 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5d-4Q5R1F6 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5d-4Q5R1F6 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5d-4Q5R1F6 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC10.32□□□□□ -0.76
Trav5d-4Q5R1F6 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5d-4Q5R1F6 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5d-4Q5R1F6 Arhgef3-204ENSMUST00000225949 3198 ntBASIC10.32□□□□□ -0.76
Trav5d-4Q5R1F6 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5d-4Q5R1F6 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5d-4Q5R1F6 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Trav5d-4Q5R1F6 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5d-4Q5R1F6 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5d-4Q5R1F6 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav5d-4Q5R1F6 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Gm31256-201ENSMUST00000194705 506 ntBASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Gm19994-201ENSMUST00000217086 586 ntBASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 CT025533.2-201ENSMUST00000228715 1248 ntBASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Gm8399-201ENSMUST00000082300 1117 ntBASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5d-4Q5R1F6 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms