Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.08□□□□□ -0.63
Urb1Q571H0 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Urb1Q571H0 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Urb1Q571H0 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Urb1Q571H0 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.08□□□□□ -0.64
Urb1Q571H0 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Urb1Q571H0 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Urb1Q571H0 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Urb1Q571H0 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Urb1Q571H0 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Urb1Q571H0 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Urb1Q571H0 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.08□□□□□ -0.64
Urb1Q571H0 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.08□□□□□ -0.64
Urb1Q571H0 Gm24231-201ENSMUST00000104315 133 ntBASIC11.08□□□□□ -0.64
Urb1Q571H0 Gm11509-201ENSMUST00000117358 325 ntBASIC11.08□□□□□ -0.64
Urb1Q571H0 Gm15352-201ENSMUST00000118696 270 ntBASIC11.08□□□□□ -0.64
Urb1Q571H0 Gm7722-201ENSMUST00000120646 741 ntBASIC11.08□□□□□ -0.64
Urb1Q571H0 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Urb1Q571H0 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.08□□□□□ -0.64
Urb1Q571H0 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Urb1Q571H0 Gm37458-201ENSMUST00000194055 410 ntBASIC11.08□□□□□ -0.64
Urb1Q571H0 Gm43186-201ENSMUST00000198130 824 ntBASIC11.08□□□□□ -0.64
Urb1Q571H0 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC11.08□□□□□ -0.64
Urb1Q571H0 Gm45575-201ENSMUST00000210283 548 ntBASIC11.08□□□□□ -0.64
Urb1Q571H0 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC11.08□□□□□ -0.64
Urb1Q571H0 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Urb1Q571H0 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
Urb1Q571H0 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Urb1Q571H0 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.08□□□□□ -0.64
Urb1Q571H0 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Urb1Q571H0 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.08□□□□□ -0.64
Urb1Q571H0 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Urb1Q571H0 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Urb1Q571H0 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Urb1Q571H0 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Urb1Q571H0 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC11.08□□□□□ -0.64
Urb1Q571H0 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Urb1Q571H0 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Urb1Q571H0 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Urb1Q571H0 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.08□□□□□ -0.64
Urb1Q571H0 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Urb1Q571H0 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Urb1Q571H0 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Urb1Q571H0 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC11.07□□□□□ -0.64
Urb1Q571H0 Gm11246-201ENSMUST00000120880 345 ntBASIC11.07□□□□□ -0.64
Urb1Q571H0 Gm25545-201ENSMUST00000122673 323 ntBASIC11.07□□□□□ -0.64
Urb1Q571H0 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.07□□□□□ -0.64
Urb1Q571H0 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Urb1Q571H0 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC11.07□□□□□ -0.64
Urb1Q571H0 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.07□□□□□ -0.64
Urb1Q571H0 AC154184.3-201ENSMUST00000225620 1090 ntBASIC11.07□□□□□ -0.64
Urb1Q571H0 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Urb1Q571H0 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Urb1Q571H0 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Urb1Q571H0 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Urb1Q571H0 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Urb1Q571H0 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Urb1Q571H0 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Urb1Q571H0 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Urb1Q571H0 Gm26013-201ENSMUST00000104404 119 ntBASIC11.07□□□□□ -0.64
Urb1Q571H0 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Urb1Q571H0 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Urb1Q571H0 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC11.07□□□□□ -0.64
Urb1Q571H0 Gm7902-201ENSMUST00000198842 947 ntBASIC11.07□□□□□ -0.64
Urb1Q571H0 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.07□□□□□ -0.64
Urb1Q571H0 Gm42657-201ENSMUST00000201746 211 ntBASIC11.07□□□□□ -0.64
Urb1Q571H0 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Urb1Q571H0 Mt1-202ENSMUST00000211807 1085 ntBASIC11.07□□□□□ -0.64
Urb1Q571H0 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Urb1Q571H0 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Urb1Q571H0 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Urb1Q571H0 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.07□□□□□ -0.64
Urb1Q571H0 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.07□□□□□ -0.64
Urb1Q571H0 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Urb1Q571H0 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Urb1Q571H0 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Urb1Q571H0 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Urb1Q571H0 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Urb1Q571H0 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Urb1Q571H0 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Urb1Q571H0 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Urb1Q571H0 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.07□□□□□ -0.64
Urb1Q571H0 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Urb1Q571H0 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Urb1Q571H0 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Urb1Q571H0 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Urb1Q571H0 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Urb1Q571H0 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.06□□□□□ -0.64
Urb1Q571H0 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.06□□□□□ -0.64
Urb1Q571H0 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.06□□□□□ -0.64
Urb1Q571H0 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Urb1Q571H0 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Urb1Q571H0 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Urb1Q571H0 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Urb1Q571H0 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
Urb1Q571H0 Gm14193-201ENSMUST00000105067 153 ntBASIC11.06□□□□□ -0.64
Urb1Q571H0 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC11.06□□□□□ -0.64
Urb1Q571H0 Gm22711-201ENSMUST00000116890 133 ntBASIC11.06□□□□□ -0.64
Urb1Q571H0 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.06□□□□□ -0.64
Urb1Q571H0 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms