Protein–RNA interactions for Protein: Q52KF3

Spire1, Protein spire homolog 1, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spire1Q52KF3 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Spire1Q52KF3 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Spire1Q52KF3 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Spire1Q52KF3 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Spire1Q52KF3 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Spire1Q52KF3 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Spire1Q52KF3 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.26□□□□□ -0.45
Spire1Q52KF3 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Spire1Q52KF3 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Spire1Q52KF3 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.26□□□□□ -0.45
Spire1Q52KF3 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Spire1Q52KF3 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Spire1Q52KF3 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Spire1Q52KF3 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Spire1Q52KF3 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Spire1Q52KF3 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Spire1Q52KF3 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Spire1Q52KF3 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Spire1Q52KF3 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.26□□□□□ -0.45
Spire1Q52KF3 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Spire1Q52KF3 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Spire1Q52KF3 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Spire1Q52KF3 Gm11949-201ENSMUST00000117640 372 ntBASIC12.26□□□□□ -0.45
Spire1Q52KF3 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.26□□□□□ -0.45
Spire1Q52KF3 Gm12516-201ENSMUST00000120819 385 ntBASIC12.26□□□□□ -0.45
Spire1Q52KF3 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC12.26□□□□□ -0.45
Spire1Q52KF3 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.26□□□□□ -0.45
Spire1Q52KF3 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Spire1Q52KF3 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Spire1Q52KF3 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Spire1Q52KF3 Gm27910-201ENSMUST00000185004 107 ntBASIC12.26□□□□□ -0.45
Spire1Q52KF3 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.26□□□□□ -0.45
Spire1Q52KF3 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.26□□□□□ -0.45
Spire1Q52KF3 Gm43186-201ENSMUST00000198130 824 ntBASIC12.26□□□□□ -0.45
Spire1Q52KF3 Gm44506-201ENSMUST00000206278 965 ntBASIC12.26□□□□□ -0.45
Spire1Q52KF3 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Spire1Q52KF3 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.26□□□□□ -0.45
Spire1Q52KF3 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.26□□□□□ -0.45
Spire1Q52KF3 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Spire1Q52KF3 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Spire1Q52KF3 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Spire1Q52KF3 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Spire1Q52KF3 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Spire1Q52KF3 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Spire1Q52KF3 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Spire1Q52KF3 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Spire1Q52KF3 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Spire1Q52KF3 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Spire1Q52KF3 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Spire1Q52KF3 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.26□□□□□ -0.45
Spire1Q52KF3 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.26□□□□□ -0.45
Spire1Q52KF3 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Spire1Q52KF3 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Spire1Q52KF3 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.25□□□□□ -0.45
Spire1Q52KF3 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Spire1Q52KF3 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Spire1Q52KF3 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Spire1Q52KF3 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Spire1Q52KF3 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.25□□□□□ -0.45
Spire1Q52KF3 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Spire1Q52KF3 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.25□□□□□ -0.45
Spire1Q52KF3 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Spire1Q52KF3 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Spire1Q52KF3 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Spire1Q52KF3 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.25□□□□□ -0.45
Spire1Q52KF3 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.25□□□□□ -0.45
Spire1Q52KF3 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.25□□□□□ -0.45
Spire1Q52KF3 Gm4654-201ENSMUST00000183305 982 ntBASIC12.25□□□□□ -0.45
Spire1Q52KF3 Mir8115-201ENSMUST00000184992 119 ntBASIC12.25□□□□□ -0.45
Spire1Q52KF3 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Spire1Q52KF3 Gm37299-201ENSMUST00000193951 826 ntBASIC12.25□□□□□ -0.45
Spire1Q52KF3 Gm9645-201ENSMUST00000197131 792 ntBASIC12.25□□□□□ -0.45
Spire1Q52KF3 Gm6450-201ENSMUST00000200896 574 ntBASIC12.25□□□□□ -0.45
Spire1Q52KF3 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.25□□□□□ -0.45
Spire1Q52KF3 Gm44980-201ENSMUST00000205826 314 ntBASIC12.25□□□□□ -0.45
Spire1Q52KF3 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC12.25□□□□□ -0.45
Spire1Q52KF3 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.25□□□□□ -0.45
Spire1Q52KF3 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Spire1Q52KF3 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Spire1Q52KF3 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.25□□□□□ -0.45
Spire1Q52KF3 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Spire1Q52KF3 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12.25□□□□□ -0.45
Spire1Q52KF3 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Spire1Q52KF3 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.25□□□□□ -0.45
Spire1Q52KF3 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Spire1Q52KF3 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Spire1Q52KF3 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Spire1Q52KF3 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Spire1Q52KF3 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.25□□□□□ -0.45
Spire1Q52KF3 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Spire1Q52KF3 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Spire1Q52KF3 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Spire1Q52KF3 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.25□□□□□ -0.45
Spire1Q52KF3 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Spire1Q52KF3 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.25□□□□□ -0.45
Spire1Q52KF3 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Spire1Q52KF3 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Spire1Q52KF3 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Spire1Q52KF3 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Spire1Q52KF3 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms