Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx49Q4FZF3 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC14.03□□□□□ -0.16
Ddx49Q4FZF3 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC14.03□□□□□ -0.16
Ddx49Q4FZF3 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC14.03□□□□□ -0.16
Ddx49Q4FZF3 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx49Q4FZF3 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC14.03□□□□□ -0.16
Ddx49Q4FZF3 Gm8956-201ENSMUST00000203939 825 ntBASIC14.03□□□□□ -0.16
Ddx49Q4FZF3 AC115122.1-201ENSMUST00000224850 1040 ntBASIC14.03□□□□□ -0.16
Ddx49Q4FZF3 AC134860.1-201ENSMUST00000224867 660 ntBASIC14.03□□□□□ -0.16
Ddx49Q4FZF3 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx49Q4FZF3 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx49Q4FZF3 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx49Q4FZF3 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx49Q4FZF3 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx49Q4FZF3 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx49Q4FZF3 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx49Q4FZF3 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ddx49Q4FZF3 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ddx49Q4FZF3 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.03□□□□□ -0.16
Ddx49Q4FZF3 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx49Q4FZF3 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx49Q4FZF3 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx49Q4FZF3 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx49Q4FZF3 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx49Q4FZF3 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx49Q4FZF3 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx49Q4FZF3 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx49Q4FZF3 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx49Q4FZF3 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx49Q4FZF3 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx49Q4FZF3 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx49Q4FZF3 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx49Q4FZF3 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx49Q4FZF3 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Ddx49Q4FZF3 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx49Q4FZF3 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.02□□□□□ -0.16
Ddx49Q4FZF3 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx49Q4FZF3 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC14.02□□□□□ -0.16
Ddx49Q4FZF3 Gm40377-201ENSMUST00000204604 2015 ntBASIC14.02□□□□□ -0.16
Ddx49Q4FZF3 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.02□□□□□ -0.16
Ddx49Q4FZF3 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx49Q4FZF3 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx49Q4FZF3 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx49Q4FZF3 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Ddx49Q4FZF3 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx49Q4FZF3 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx49Q4FZF3 Gm13937-201ENSMUST00000121000 988 ntBASIC14.02□□□□□ -0.17
Ddx49Q4FZF3 Gm8737-201ENSMUST00000122208 642 ntBASIC14.02□□□□□ -0.17
Ddx49Q4FZF3 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx49Q4FZF3 Gm23045-201ENSMUST00000175041 96 ntBASIC14.02□□□□□ -0.17
Ddx49Q4FZF3 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC14.02□□□□□ -0.17
Ddx49Q4FZF3 Gm42657-201ENSMUST00000201746 211 ntBASIC14.02□□□□□ -0.17
Ddx49Q4FZF3 Gm19091-201ENSMUST00000208120 978 ntBASIC14.02□□□□□ -0.17
Ddx49Q4FZF3 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.17
Ddx49Q4FZF3 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC14.02□□□□□ -0.17
Ddx49Q4FZF3 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx49Q4FZF3 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx49Q4FZF3 Gm5705-201ENSMUST00000066241 711 ntBASIC14.02□□□□□ -0.17
Ddx49Q4FZF3 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx49Q4FZF3 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx49Q4FZF3 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx49Q4FZF3 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx49Q4FZF3 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx49Q4FZF3 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx49Q4FZF3 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Ddx49Q4FZF3 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx49Q4FZF3 AC164426.2-201ENSMUST00000225993 2492 ntBASIC14.02□□□□□ -0.17
Ddx49Q4FZF3 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC14.02□□□□□ -0.17
Ddx49Q4FZF3 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Ddx49Q4FZF3 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx49Q4FZF3 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC14.02□□□□□ -0.17
Ddx49Q4FZF3 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx49Q4FZF3 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx49Q4FZF3 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx49Q4FZF3 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx49Q4FZF3 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx49Q4FZF3 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx49Q4FZF3 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx49Q4FZF3 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx49Q4FZF3 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx49Q4FZF3 n-R5s64-201ENSMUST00000102019 119 ntBASIC14.01□□□□□ -0.17
Ddx49Q4FZF3 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ddx49Q4FZF3 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC14.01□□□□□ -0.17
Ddx49Q4FZF3 Gm12164-201ENSMUST00000121695 551 ntBASIC14.01□□□□□ -0.17
Ddx49Q4FZF3 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx49Q4FZF3 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx49Q4FZF3 Gm23218-201ENSMUST00000158124 276 ntBASIC14.01□□□□□ -0.17
Ddx49Q4FZF3 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Ddx49Q4FZF3 Gm6867-201ENSMUST00000219165 425 ntBASIC14.01□□□□□ -0.17
Ddx49Q4FZF3 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx49Q4FZF3 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC14.01□□□□□ -0.17
Ddx49Q4FZF3 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx49Q4FZF3 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx49Q4FZF3 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx49Q4FZF3 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.01□□□□□ -0.17
Ddx49Q4FZF3 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ddx49Q4FZF3 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx49Q4FZF3 AC173482.6-201ENSMUST00000225889 1741 ntBASIC14.01□□□□□ -0.17
Ddx49Q4FZF3 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx49Q4FZF3 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms