Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim80Q3V061 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim80Q3V061 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim80Q3V061 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.46□□□□□ -0.42
Trim80Q3V061 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim80Q3V061 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim80Q3V061 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim80Q3V061 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trim80Q3V061 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.46□□□□□ -0.42
Trim80Q3V061 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim80Q3V061 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim80Q3V061 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Trim80Q3V061 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim80Q3V061 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trim80Q3V061 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim80Q3V061 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim80Q3V061 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim80Q3V061 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim80Q3V061 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim80Q3V061 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim80Q3V061 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.45□□□□□ -0.42
Trim80Q3V061 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim80Q3V061 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim80Q3V061 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim80Q3V061 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim80Q3V061 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim80Q3V061 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim80Q3V061 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Trim80Q3V061 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim80Q3V061 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim80Q3V061 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.45□□□□□ -0.42
Trim80Q3V061 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trim80Q3V061 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim80Q3V061 Gm13369-201ENSMUST00000119442 987 ntBASIC12.45□□□□□ -0.42
Trim80Q3V061 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim80Q3V061 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.45□□□□□ -0.42
Trim80Q3V061 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim80Q3V061 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim80Q3V061 Gm29396-201ENSMUST00000185659 716 ntBASIC12.45□□□□□ -0.42
Trim80Q3V061 Gm29199-201ENSMUST00000187766 775 ntBASIC12.45□□□□□ -0.42
Trim80Q3V061 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.45□□□□□ -0.42
Trim80Q3V061 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.45□□□□□ -0.42
Trim80Q3V061 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim80Q3V061 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim80Q3V061 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.45□□□□□ -0.42
Trim80Q3V061 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim80Q3V061 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.45□□□□□ -0.42
Trim80Q3V061 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim80Q3V061 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim80Q3V061 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trim80Q3V061 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim80Q3V061 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim80Q3V061 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim80Q3V061 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim80Q3V061 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trim80Q3V061 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trim80Q3V061 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim80Q3V061 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim80Q3V061 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.45□□□□□ -0.42
Trim80Q3V061 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trim80Q3V061 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim80Q3V061 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim80Q3V061 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim80Q3V061 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim80Q3V061 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim80Q3V061 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim80Q3V061 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim80Q3V061 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim80Q3V061 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trim80Q3V061 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim80Q3V061 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Trim80Q3V061 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trim80Q3V061 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim80Q3V061 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim80Q3V061 Mir877-201ENSMUST00000104738 85 ntBASIC12.44□□□□□ -0.42
Trim80Q3V061 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Trim80Q3V061 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.44□□□□□ -0.42
Trim80Q3V061 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim80Q3V061 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.44□□□□□ -0.42
Trim80Q3V061 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.44□□□□□ -0.42
Trim80Q3V061 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim80Q3V061 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim80Q3V061 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim80Q3V061 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.44□□□□□ -0.42
Trim80Q3V061 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim80Q3V061 Gm42599-201ENSMUST00000201308 469 ntBASIC12.44□□□□□ -0.42
Trim80Q3V061 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.44□□□□□ -0.42
Trim80Q3V061 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.44□□□□□ -0.42
Trim80Q3V061 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.44□□□□□ -0.42
Trim80Q3V061 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim80Q3V061 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.44□□□□□ -0.42
Trim80Q3V061 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim80Q3V061 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim80Q3V061 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.44□□□□□ -0.42
Trim80Q3V061 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim80Q3V061 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim80Q3V061 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim80Q3V061 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim80Q3V061 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim80Q3V061 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms