Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Gm26368-201ENSMUST00000157826 118 ntBASIC12.11□□□□□ -0.47
Fam196aQ3USH1 Gm17070-201ENSMUST00000170463 784 ntBASIC12.11□□□□□ -0.47
Fam196aQ3USH1 Mir6941-201ENSMUST00000184711 59 ntBASIC12.11□□□□□ -0.47
Fam196aQ3USH1 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.11□□□□□ -0.47
Fam196aQ3USH1 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam196aQ3USH1 Gm6855-201ENSMUST00000206307 790 ntBASIC12.11□□□□□ -0.47
Fam196aQ3USH1 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Fam196aQ3USH1 Arhgef33-210ENSMUST00000225548 456 ntBASIC12.11□□□□□ -0.47
Fam196aQ3USH1 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam196aQ3USH1 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.11□□□□□ -0.47
Fam196aQ3USH1 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam196aQ3USH1 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.11□□□□□ -0.47
Fam196aQ3USH1 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Fam196aQ3USH1 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Fam196aQ3USH1 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam196aQ3USH1 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Fam196aQ3USH1 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam196aQ3USH1 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam196aQ3USH1 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam196aQ3USH1 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.11□□□□□ -0.47
Fam196aQ3USH1 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam196aQ3USH1 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam196aQ3USH1 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.1□□□□□ -0.47
Fam196aQ3USH1 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fam196aQ3USH1 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fam196aQ3USH1 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fam196aQ3USH1 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fam196aQ3USH1 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Fam196aQ3USH1 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fam196aQ3USH1 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.1□□□□□ -0.47
Fam196aQ3USH1 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fam196aQ3USH1 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Fam196aQ3USH1 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fam196aQ3USH1 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fam196aQ3USH1 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fam196aQ3USH1 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fam196aQ3USH1 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fam196aQ3USH1 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC12.1□□□□□ -0.47
Fam196aQ3USH1 Gm11619-201ENSMUST00000117474 237 ntBASIC12.1□□□□□ -0.47
Fam196aQ3USH1 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fam196aQ3USH1 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC12.1□□□□□ -0.47
Fam196aQ3USH1 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Fam196aQ3USH1 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Fam196aQ3USH1 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC12.1□□□□□ -0.47
Fam196aQ3USH1 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC12.1□□□□□ -0.47
Fam196aQ3USH1 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fam196aQ3USH1 Gm43912-201ENSMUST00000204352 538 ntBASIC12.1□□□□□ -0.47
Fam196aQ3USH1 Gm6108-201ENSMUST00000208365 367 ntBASIC12.1□□□□□ -0.47
Fam196aQ3USH1 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fam196aQ3USH1 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fam196aQ3USH1 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fam196aQ3USH1 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fam196aQ3USH1 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Fam196aQ3USH1 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.1□□□□□ -0.47
Fam196aQ3USH1 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Fam196aQ3USH1 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fam196aQ3USH1 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fam196aQ3USH1 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.1□□□□□ -0.47
Fam196aQ3USH1 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fam196aQ3USH1 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fam196aQ3USH1 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fam196aQ3USH1 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fam196aQ3USH1 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Fam196aQ3USH1 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Fam196aQ3USH1 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fam196aQ3USH1 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Fam196aQ3USH1 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fam196aQ3USH1 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fam196aQ3USH1 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Fam196aQ3USH1 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Fam196aQ3USH1 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fam196aQ3USH1 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fam196aQ3USH1 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fam196aQ3USH1 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Fam196aQ3USH1 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fam196aQ3USH1 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Fam196aQ3USH1 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC12.09□□□□□ -0.47
Fam196aQ3USH1 Gm14213-201ENSMUST00000119778 768 ntBASIC12.09□□□□□ -0.47
Fam196aQ3USH1 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Fam196aQ3USH1 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.09□□□□□ -0.47
Fam196aQ3USH1 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC12.09□□□□□ -0.47
Fam196aQ3USH1 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Fam196aQ3USH1 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fam196aQ3USH1 Gm25998-201ENSMUST00000175397 53 ntBASIC12.09□□□□□ -0.47
Fam196aQ3USH1 Gm42433-201ENSMUST00000196806 940 ntBASIC12.09□□□□□ -0.47
Fam196aQ3USH1 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.09□□□□□ -0.47
Fam196aQ3USH1 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fam196aQ3USH1 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fam196aQ3USH1 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fam196aQ3USH1 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Fam196aQ3USH1 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Fam196aQ3USH1 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Fam196aQ3USH1 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fam196aQ3USH1 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Fam196aQ3USH1 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Fam196aQ3USH1 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fam196aQ3USH1 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fam196aQ3USH1 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fam196aQ3USH1 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fam196aQ3USH1 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 128.7 ms