Protein–RNA interactions for Protein: Q3URI6

Zfp560, Zinc finger protein 560, mousemouse

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp560Q3URI6 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Zfp560Q3URI6 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.08□□□□□ -0.48
Zfp560Q3URI6 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.08□□□□□ -0.48
Zfp560Q3URI6 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.08□□□□□ -0.48
Zfp560Q3URI6 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.08□□□□□ -0.48
Zfp560Q3URI6 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Zfp560Q3URI6 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Zfp560Q3URI6 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Zfp560Q3URI6 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Zfp560Q3URI6 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Zfp560Q3URI6 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Zfp560Q3URI6 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Zfp560Q3URI6 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Zfp560Q3URI6 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Zfp560Q3URI6 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Zfp560Q3URI6 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Zfp560Q3URI6 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Zfp560Q3URI6 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp560Q3URI6 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp560Q3URI6 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Zfp560Q3URI6 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Zfp560Q3URI6 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp560Q3URI6 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp560Q3URI6 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp560Q3URI6 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp560Q3URI6 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp560Q3URI6 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp560Q3URI6 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp560Q3URI6 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp560Q3URI6 Gm15610-201ENSMUST00000120584 195 ntBASIC12.07□□□□□ -0.48
Zfp560Q3URI6 Gm12164-201ENSMUST00000121695 551 ntBASIC12.07□□□□□ -0.48
Zfp560Q3URI6 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp560Q3URI6 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp560Q3URI6 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Zfp560Q3URI6 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp560Q3URI6 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.07□□□□□ -0.48
Zfp560Q3URI6 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp560Q3URI6 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp560Q3URI6 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp560Q3URI6 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp560Q3URI6 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp560Q3URI6 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp560Q3URI6 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp560Q3URI6 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp560Q3URI6 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.07□□□□□ -0.48
Zfp560Q3URI6 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp560Q3URI6 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Zfp560Q3URI6 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp560Q3URI6 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp560Q3URI6 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.07□□□□□ -0.48
Zfp560Q3URI6 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp560Q3URI6 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.07□□□□□ -0.48
Zfp560Q3URI6 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp560Q3URI6 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp560Q3URI6 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp560Q3URI6 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp560Q3URI6 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Zfp560Q3URI6 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Zfp560Q3URI6 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp560Q3URI6 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp560Q3URI6 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Zfp560Q3URI6 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp560Q3URI6 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Zfp560Q3URI6 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp560Q3URI6 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Zfp560Q3URI6 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.06□□□□□ -0.48
Zfp560Q3URI6 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Zfp560Q3URI6 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Zfp560Q3URI6 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Zfp560Q3URI6 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.06□□□□□ -0.48
Zfp560Q3URI6 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Zfp560Q3URI6 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Zfp560Q3URI6 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Zfp560Q3URI6 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Zfp560Q3URI6 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Zfp560Q3URI6 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Zfp560Q3URI6 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Zfp560Q3URI6 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.06□□□□□ -0.48
Zfp560Q3URI6 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Zfp560Q3URI6 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Zfp560Q3URI6 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Zfp560Q3URI6 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Zfp560Q3URI6 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.06□□□□□ -0.48
Zfp560Q3URI6 Gm43962-201ENSMUST00000203898 190 ntBASIC12.06□□□□□ -0.48
Zfp560Q3URI6 Gm17812-201ENSMUST00000204935 318 ntBASIC12.06□□□□□ -0.48
Zfp560Q3URI6 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.06□□□□□ -0.48
Zfp560Q3URI6 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.06□□□□□ -0.48
Zfp560Q3URI6 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Zfp560Q3URI6 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Zfp560Q3URI6 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Zfp560Q3URI6 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Zfp560Q3URI6 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Zfp560Q3URI6 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Zfp560Q3URI6 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Zfp560Q3URI6 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Zfp560Q3URI6 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Zfp560Q3URI6 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Zfp560Q3URI6 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Zfp560Q3URI6 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.06□□□□□ -0.48
Zfp560Q3URI6 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms