Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.32□□□□□ -0.6
Brf2Q3UAW9 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Brf2Q3UAW9 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Brf2Q3UAW9 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Brf2Q3UAW9 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Brf2Q3UAW9 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Brf2Q3UAW9 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Brf2Q3UAW9 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Brf2Q3UAW9 Gm23270-201ENSMUST00000104055 131 ntBASIC11.32□□□□□ -0.6
Brf2Q3UAW9 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.32□□□□□ -0.6
Brf2Q3UAW9 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Brf2Q3UAW9 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.32□□□□□ -0.6
Brf2Q3UAW9 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Brf2Q3UAW9 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Brf2Q3UAW9 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Brf2Q3UAW9 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Brf2Q3UAW9 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.32□□□□□ -0.6
Brf2Q3UAW9 Gm5706-201ENSMUST00000181525 993 ntBASIC11.32□□□□□ -0.6
Brf2Q3UAW9 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.32□□□□□ -0.6
Brf2Q3UAW9 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.32□□□□□ -0.6
Brf2Q3UAW9 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Brf2Q3UAW9 Gm17931-201ENSMUST00000208132 634 ntBASIC11.32□□□□□ -0.6
Brf2Q3UAW9 Gm8712-201ENSMUST00000221090 701 ntBASIC11.32□□□□□ -0.6
Brf2Q3UAW9 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.32□□□□□ -0.6
Brf2Q3UAW9 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Brf2Q3UAW9 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Brf2Q3UAW9 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Brf2Q3UAW9 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Brf2Q3UAW9 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Brf2Q3UAW9 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Brf2Q3UAW9 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.32□□□□□ -0.6
Brf2Q3UAW9 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Brf2Q3UAW9 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.32□□□□□ -0.6
Brf2Q3UAW9 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Brf2Q3UAW9 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Brf2Q3UAW9 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Brf2Q3UAW9 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Brf2Q3UAW9 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Brf2Q3UAW9 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.32□□□□□ -0.6
Brf2Q3UAW9 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Brf2Q3UAW9 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.32□□□□□ -0.6
Brf2Q3UAW9 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Brf2Q3UAW9 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Brf2Q3UAW9 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Brf2Q3UAW9 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Brf2Q3UAW9 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Brf2Q3UAW9 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Brf2Q3UAW9 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Brf2Q3UAW9 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Brf2Q3UAW9 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Brf2Q3UAW9 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Brf2Q3UAW9 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Brf2Q3UAW9 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Brf2Q3UAW9 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.31□□□□□ -0.6
Brf2Q3UAW9 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Brf2Q3UAW9 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Brf2Q3UAW9 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Brf2Q3UAW9 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Brf2Q3UAW9 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Brf2Q3UAW9 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Brf2Q3UAW9 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Brf2Q3UAW9 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Brf2Q3UAW9 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.31□□□□□ -0.6
Brf2Q3UAW9 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.31□□□□□ -0.6
Brf2Q3UAW9 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Brf2Q3UAW9 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Brf2Q3UAW9 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Brf2Q3UAW9 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Brf2Q3UAW9 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.31□□□□□ -0.6
Brf2Q3UAW9 Gm6334-201ENSMUST00000207083 228 ntBASIC11.31□□□□□ -0.6
Brf2Q3UAW9 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Brf2Q3UAW9 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.31□□□□□ -0.6
Brf2Q3UAW9 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Brf2Q3UAW9 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Brf2Q3UAW9 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Brf2Q3UAW9 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.31□□□□□ -0.6
Brf2Q3UAW9 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Brf2Q3UAW9 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Brf2Q3UAW9 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Brf2Q3UAW9 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Brf2Q3UAW9 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Brf2Q3UAW9 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Brf2Q3UAW9 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Brf2Q3UAW9 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Brf2Q3UAW9 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Brf2Q3UAW9 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Brf2Q3UAW9 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Brf2Q3UAW9 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.31□□□□□ -0.6
Brf2Q3UAW9 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Brf2Q3UAW9 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Brf2Q3UAW9 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms