Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Gm45847-201ENSMUST00000209402 1880 ntTSL 3 BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Rpsa-ps11-201ENSMUST00000118446 889 ntBASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Gm14983-201ENSMUST00000121551 323 ntBASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Gm13781-201ENSMUST00000124153 492 ntTSL 2 BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 1700028P15Rik-203ENSMUST00000151904 519 ntTSL 3 BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 1700063D05Rik-203ENSMUST00000191461 666 ntTSL 2 BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Prss23os-203ENSMUST00000208814 975 ntTSL 5 BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Prss23os-204ENSMUST00000209064 972 ntTSL 5 BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Gm25148-201ENSMUST00000104611 123 ntBASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Krtap29-1-201ENSMUST00000105051 1029 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Gm5400-201ENSMUST00000118494 943 ntBASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Lrmda-206ENSMUST00000162540 742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Gm17733-201ENSMUST00000181883 1048 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Gm43674-201ENSMUST00000196313 791 ntBASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Gm44498-201ENSMUST00000199509 111 ntBASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Gm6342-201ENSMUST00000204344 766 ntBASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Gm7424-201ENSMUST00000206919 902 ntBASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Gm33466-201ENSMUST00000199819 1689 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Zfp125-201ENSMUST00000079237 2488 ntBASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Gm15516-201ENSMUST00000117292 193 ntBASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Gm14276-201ENSMUST00000117941 720 ntBASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Gm14407-201ENSMUST00000121260 447 ntBASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Gm12362-201ENSMUST00000121986 342 ntBASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Gm25343-201ENSMUST00000157460 107 ntBASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Gm37012-201ENSMUST00000194991 1078 ntBASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Gm30619-201ENSMUST00000213962 686 ntBASIC6.13□□□□□ -1.43
Ush2AQ2QI47 AC166061.1-201ENSMUST00000225163 1138 ntBASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Gm6028-201ENSMUST00000077111 574 ntBASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Spata7-202ENSMUST00000101144 1541 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Gm37736-201ENSMUST00000193564 2802 ntBASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Gm8038-201ENSMUST00000164674 2044 ntBASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Gm10639-202ENSMUST00000121273 873 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Gm6633-201ENSMUST00000173851 270 ntBASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Gm24300-201ENSMUST00000177809 109 ntBASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Gm24017-201ENSMUST00000178726 109 ntBASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Gm23952-201ENSMUST00000179380 109 ntBASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Gm19013-201ENSMUST00000183895 1222 ntBASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Gm19014-201ENSMUST00000184828 1189 ntBASIC6.13□□□□□ -1.43
Ush2AQ2QI47 1700095A13Rik-201ENSMUST00000185460 711 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Olfr371-202ENSMUST00000218663 1162 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Slamf9-201ENSMUST00000027830 1313 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Gm18983-201ENSMUST00000222884 2729 ntBASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ush2AQ2QI47 Gm11771-201ENSMUST00000118124 732 ntBASIC6.12□□□□□ -1.43
Ush2AQ2QI47 Gm14617-201ENSMUST00000128053 798 ntTSL 5 BASIC6.12□□□□□ -1.43
Ush2AQ2QI47 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC6.12□□□□□ -1.43
Ush2AQ2QI47 Gm17797-201ENSMUST00000182175 997 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms