Protein–RNA interactions for Protein: Q0PD08

Rab42, Ras-related protein Rab-42, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab42Q0PD08 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.67□□□□□ -0.7
Rab42Q0PD08 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rab42Q0PD08 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Rab42Q0PD08 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rab42Q0PD08 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rab42Q0PD08 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Rab42Q0PD08 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Rab42Q0PD08 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Rab42Q0PD08 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Rab42Q0PD08 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Rab42Q0PD08 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rab42Q0PD08 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC10.66□□□□□ -0.7
Rab42Q0PD08 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rab42Q0PD08 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rab42Q0PD08 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rab42Q0PD08 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rab42Q0PD08 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rab42Q0PD08 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Rab42Q0PD08 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rab42Q0PD08 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC10.66□□□□□ -0.7
Rab42Q0PD08 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rab42Q0PD08 Gm5638-201ENSMUST00000118618 1258 ntBASIC10.66□□□□□ -0.7
Rab42Q0PD08 Gm16479-201ENSMUST00000121706 932 ntBASIC10.66□□□□□ -0.7
Rab42Q0PD08 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC10.66□□□□□ -0.7
Rab42Q0PD08 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC10.66□□□□□ -0.7
Rab42Q0PD08 Gm24644-201ENSMUST00000157114 139 ntBASIC10.66□□□□□ -0.7
Rab42Q0PD08 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rab42Q0PD08 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rab42Q0PD08 Gm29649-201ENSMUST00000185649 419 ntBASIC10.66□□□□□ -0.7
Rab42Q0PD08 Igkv2-116-201ENSMUST00000199327 362 ntBASIC10.66□□□□□ -0.7
Rab42Q0PD08 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC10.66□□□□□ -0.7
Rab42Q0PD08 Gm44799-201ENSMUST00000207639 1202 ntBASIC10.66□□□□□ -0.7
Rab42Q0PD08 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC10.66□□□□□ -0.7
Rab42Q0PD08 Gm7653-201ENSMUST00000214567 508 ntBASIC10.66□□□□□ -0.7
Rab42Q0PD08 Gm5035-201ENSMUST00000215581 927 ntBASIC10.66□□□□□ -0.7
Rab42Q0PD08 Cdk7-205ENSMUST00000225990 1159 ntBASIC10.66□□□□□ -0.7
Rab42Q0PD08 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rab42Q0PD08 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rab42Q0PD08 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Rab42Q0PD08 n-R5s77-201ENSMUST00000083757 119 ntBASIC10.66□□□□□ -0.7
Rab42Q0PD08 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rab42Q0PD08 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Rab42Q0PD08 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rab42Q0PD08 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Rab42Q0PD08 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rab42Q0PD08 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rab42Q0PD08 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rab42Q0PD08 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC10.66□□□□□ -0.7
Rab42Q0PD08 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rab42Q0PD08 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rab42Q0PD08 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rab42Q0PD08 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rab42Q0PD08 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rab42Q0PD08 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rab42Q0PD08 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC10.65□□□□□ -0.7
Rab42Q0PD08 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rab42Q0PD08 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Rab42Q0PD08 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Rab42Q0PD08 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rab42Q0PD08 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.65□□□□□ -0.7
Rab42Q0PD08 Gm14608-201ENSMUST00000120030 1553 ntBASIC10.65□□□□□ -0.7
Rab42Q0PD08 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rab42Q0PD08 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Rab42Q0PD08 Gm15163-201ENSMUST00000120749 1302 ntBASIC10.65□□□□□ -0.7
Rab42Q0PD08 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rab42Q0PD08 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.65□□□□□ -0.7
Rab42Q0PD08 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rab42Q0PD08 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rab42Q0PD08 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rab42Q0PD08 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Rab42Q0PD08 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rab42Q0PD08 Rims2-204ENSMUST00000226410 3685 ntBASIC10.65□□□□□ -0.7
Rab42Q0PD08 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rab42Q0PD08 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rab42Q0PD08 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rab42Q0PD08 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rab42Q0PD08 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC10.65□□□□□ -0.7
Rab42Q0PD08 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rab42Q0PD08 Gm12201-201ENSMUST00000120657 1234 ntBASIC10.65□□□□□ -0.7
Rab42Q0PD08 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Rab42Q0PD08 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Rab42Q0PD08 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC10.65□□□□□ -0.7
Rab42Q0PD08 Gm27331-201ENSMUST00000183705 60 ntBASIC10.65□□□□□ -0.7
Rab42Q0PD08 Gm27839-201ENSMUST00000184242 106 ntBASIC10.65□□□□□ -0.7
Rab42Q0PD08 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Rab42Q0PD08 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC10.65□□□□□ -0.7
Rab42Q0PD08 Gm18916-201ENSMUST00000198264 1246 ntBASIC10.65□□□□□ -0.7
Rab42Q0PD08 Gm8099-201ENSMUST00000200510 742 ntBASIC10.65□□□□□ -0.7
Rab42Q0PD08 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC10.65□□□□□ -0.7
Rab42Q0PD08 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Rab42Q0PD08 Gm29705-201ENSMUST00000212598 474 ntBASIC10.65□□□□□ -0.7
Rab42Q0PD08 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rab42Q0PD08 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC10.65□□□□□ -0.7
Rab42Q0PD08 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rab42Q0PD08 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rab42Q0PD08 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rab42Q0PD08 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rab42Q0PD08 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rab42Q0PD08 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rab42Q0PD08 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms