Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf1Q07802 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.22□□□□□ -0.45
Ebf1Q07802 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf1Q07802 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf1Q07802 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Ebf1Q07802 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf1Q07802 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf1Q07802 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf1Q07802 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.21□□□□□ -0.45
Ebf1Q07802 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf1Q07802 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf1Q07802 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf1Q07802 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.21□□□□□ -0.45
Ebf1Q07802 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf1Q07802 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.21□□□□□ -0.45
Ebf1Q07802 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf1Q07802 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ebf1Q07802 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Ebf1Q07802 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf1Q07802 Gm23119-201ENSMUST00000158610 140 ntBASIC12.21□□□□□ -0.45
Ebf1Q07802 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf1Q07802 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf1Q07802 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC12.21□□□□□ -0.45
Ebf1Q07802 Gm43184-201ENSMUST00000197247 542 ntBASIC12.21□□□□□ -0.45
Ebf1Q07802 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf1Q07802 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC12.21□□□□□ -0.45
Ebf1Q07802 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf1Q07802 Gm5455-201ENSMUST00000058710 715 ntBASIC12.21□□□□□ -0.45
Ebf1Q07802 Ginm1-202ENSMUST00000065124 300 ntBASIC12.21□□□□□ -0.45
Ebf1Q07802 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf1Q07802 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Ebf1Q07802 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ebf1Q07802 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf1Q07802 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf1Q07802 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf1Q07802 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.21□□□□□ -0.45
Ebf1Q07802 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf1Q07802 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf1Q07802 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf1Q07802 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Ebf1Q07802 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ebf1Q07802 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ebf1Q07802 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ebf1Q07802 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ebf1Q07802 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.21□□□□□ -0.46
Ebf1Q07802 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ebf1Q07802 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.21□□□□□ -0.46
Ebf1Q07802 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ebf1Q07802 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Ebf1Q07802 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.2□□□□□ -0.46
Ebf1Q07802 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf1Q07802 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf1Q07802 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.2□□□□□ -0.46
Ebf1Q07802 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf1Q07802 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf1Q07802 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf1Q07802 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf1Q07802 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf1Q07802 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ebf1Q07802 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf1Q07802 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ebf1Q07802 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.2□□□□□ -0.46
Ebf1Q07802 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf1Q07802 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Ebf1Q07802 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf1Q07802 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf1Q07802 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf1Q07802 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf1Q07802 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf1Q07802 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Ebf1Q07802 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.2□□□□□ -0.46
Ebf1Q07802 Gm14314-201ENSMUST00000118225 1015 ntBASIC12.2□□□□□ -0.46
Ebf1Q07802 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ebf1Q07802 Gm15881-201ENSMUST00000148792 942 ntBASIC12.2□□□□□ -0.46
Ebf1Q07802 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC12.2□□□□□ -0.46
Ebf1Q07802 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf1Q07802 Gm37246-201ENSMUST00000192665 835 ntBASIC12.2□□□□□ -0.46
Ebf1Q07802 Gm7600-201ENSMUST00000209657 785 ntBASIC12.2□□□□□ -0.46
Ebf1Q07802 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf1Q07802 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.2□□□□□ -0.46
Ebf1Q07802 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.2□□□□□ -0.46
Ebf1Q07802 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ebf1Q07802 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf1Q07802 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf1Q07802 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.2□□□□□ -0.46
Ebf1Q07802 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ebf1Q07802 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ebf1Q07802 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf1Q07802 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Ebf1Q07802 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Ebf1Q07802 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf1Q07802 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf1Q07802 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.2□□□□□ -0.46
Ebf1Q07802 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf1Q07802 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf1Q07802 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf1Q07802 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf1Q07802 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ebf1Q07802 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ebf1Q07802 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms