Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.12□□□□□ -0.47
Col9a1Q05722 Rhox3f-203ENSMUST00000184451 1008 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Col9a1Q05722 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Col9a1Q05722 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC12.12□□□□□ -0.47
Col9a1Q05722 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col9a1Q05722 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col9a1Q05722 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC12.12□□□□□ -0.47
Col9a1Q05722 Gm40646-202ENSMUST00000218796 793 ntTSL 5 BASIC12.12□□□□□ -0.47
Col9a1Q05722 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col9a1Q05722 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.12□□□□□ -0.47
Col9a1Q05722 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col9a1Q05722 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col9a1Q05722 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col9a1Q05722 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Col9a1Q05722 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col9a1Q05722 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col9a1Q05722 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col9a1Q05722 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.12□□□□□ -0.47
Col9a1Q05722 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col9a1Q05722 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col9a1Q05722 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col9a1Q05722 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col9a1Q05722 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col9a1Q05722 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col9a1Q05722 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col9a1Q05722 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col9a1Q05722 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col9a1Q05722 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.12□□□□□ -0.47
Col9a1Q05722 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Col9a1Q05722 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col9a1Q05722 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a1Q05722 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a1Q05722 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a1Q05722 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Col9a1Q05722 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a1Q05722 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a1Q05722 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a1Q05722 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a1Q05722 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a1Q05722 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Col9a1Q05722 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Col9a1Q05722 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a1Q05722 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a1Q05722 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a1Q05722 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a1Q05722 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a1Q05722 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Col9a1Q05722 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a1Q05722 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a1Q05722 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a1Q05722 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Col9a1Q05722 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a1Q05722 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a1Q05722 AA623943-201ENSMUST00000121794 354 ntBASIC12.11□□□□□ -0.47
Col9a1Q05722 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a1Q05722 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC12.11□□□□□ -0.47
Col9a1Q05722 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a1Q05722 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a1Q05722 Mir3473a-201ENSMUST00000175011 78 ntBASIC12.11□□□□□ -0.47
Col9a1Q05722 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC12.11□□□□□ -0.47
Col9a1Q05722 Gm26706-201ENSMUST00000180718 746 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a1Q05722 Gm17944-201ENSMUST00000186351 643 ntBASIC12.11□□□□□ -0.47
Col9a1Q05722 Gm21301-201ENSMUST00000189476 699 ntBASIC12.11□□□□□ -0.47
Col9a1Q05722 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a1Q05722 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC12.11□□□□□ -0.47
Col9a1Q05722 Gm7192-201ENSMUST00000210793 1137 ntBASIC12.11□□□□□ -0.47
Col9a1Q05722 Olfr46-202ENSMUST00000211771 1190 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Col9a1Q05722 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC12.11□□□□□ -0.47
Col9a1Q05722 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.11□□□□□ -0.47
Col9a1Q05722 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC12.11□□□□□ -0.47
Col9a1Q05722 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Col9a1Q05722 Clec1b-201ENSMUST00000032262 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a1Q05722 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Col9a1Q05722 Olfr434-201ENSMUST00000076752 1056 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Col9a1Q05722 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a1Q05722 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a1Q05722 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a1Q05722 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a1Q05722 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a1Q05722 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.11□□□□□ -0.47
Col9a1Q05722 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a1Q05722 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a1Q05722 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a1Q05722 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a1Q05722 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a1Q05722 Gm42432-201ENSMUST00000197902 1617 ntBASIC12.11□□□□□ -0.47
Col9a1Q05722 Gm42766-201ENSMUST00000200233 1332 ntBASIC12.11□□□□□ -0.47
Col9a1Q05722 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.1□□□□□ -0.47
Col9a1Q05722 Gm10652-201ENSMUST00000199790 2622 ntBASIC12.1□□□□□ -0.47
Col9a1Q05722 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col9a1Q05722 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Col9a1Q05722 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Col9a1Q05722 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col9a1Q05722 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col9a1Q05722 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.1□□□□□ -0.47
Col9a1Q05722 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Col9a1Q05722 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Col9a1Q05722 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col9a1Q05722 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.1□□□□□ -0.47
Col9a1Q05722 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms