Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Gm45930-201ENSMUST00000221330 292 ntBASIC10.28□□□□□ -0.76
Smn1P97801 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smn1P97801 Gm6091-201ENSMUST00000098307 165 ntBASIC10.28□□□□□ -0.76
Smn1P97801 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.28□□□□□ -0.76
Smn1P97801 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smn1P97801 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smn1P97801 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smn1P97801 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smn1P97801 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smn1P97801 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smn1P97801 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smn1P97801 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smn1P97801 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smn1P97801 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smn1P97801 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smn1P97801 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smn1P97801 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smn1P97801 Rgr-203ENSMUST00000225070 4704 ntBASIC10.28□□□□□ -0.76
Smn1P97801 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smn1P97801 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Smn1P97801 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Smn1P97801 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Smn1P97801 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Smn1P97801 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.27□□□□□ -0.76
Smn1P97801 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.76
Smn1P97801 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smn1P97801 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smn1P97801 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC10.27□□□□□ -0.77
Smn1P97801 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smn1P97801 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Smn1P97801 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smn1P97801 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smn1P97801 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smn1P97801 Mup-ps23-201ENSMUST00000118063 630 ntBASIC10.27□□□□□ -0.77
Smn1P97801 Gm13736-201ENSMUST00000119272 253 ntBASIC10.27□□□□□ -0.77
Smn1P97801 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC10.27□□□□□ -0.77
Smn1P97801 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smn1P97801 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC10.27□□□□□ -0.77
Smn1P97801 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC10.27□□□□□ -0.77
Smn1P97801 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smn1P97801 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Smn1P97801 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smn1P97801 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smn1P97801 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smn1P97801 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smn1P97801 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smn1P97801 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smn1P97801 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smn1P97801 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smn1P97801 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.27□□□□□ -0.77
Smn1P97801 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smn1P97801 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smn1P97801 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smn1P97801 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smn1P97801 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Smn1P97801 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smn1P97801 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.27□□□□□ -0.77
Smn1P97801 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smn1P97801 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC10.26□□□□□ -0.77
Smn1P97801 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smn1P97801 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.26□□□□□ -0.77
Smn1P97801 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Smn1P97801 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smn1P97801 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smn1P97801 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.26□□□□□ -0.77
Smn1P97801 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Smn1P97801 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smn1P97801 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smn1P97801 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smn1P97801 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smn1P97801 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Smn1P97801 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smn1P97801 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC10.26□□□□□ -0.77
Smn1P97801 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.26□□□□□ -0.77
Smn1P97801 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smn1P97801 Gm13342-201ENSMUST00000121055 207 ntBASIC10.26□□□□□ -0.77
Smn1P97801 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Smn1P97801 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC10.26□□□□□ -0.77
Smn1P97801 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC10.26□□□□□ -0.77
Smn1P97801 Gm26927-201ENSMUST00000182385 965 ntBASIC10.26□□□□□ -0.77
Smn1P97801 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Smn1P97801 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC10.26□□□□□ -0.77
Smn1P97801 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smn1P97801 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Smn1P97801 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.26□□□□□ -0.77
Smn1P97801 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.26□□□□□ -0.77
Smn1P97801 Gm18584-201ENSMUST00000203098 964 ntBASIC10.26□□□□□ -0.77
Smn1P97801 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smn1P97801 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smn1P97801 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Smn1P97801 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smn1P97801 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smn1P97801 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smn1P97801 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC10.26□□□□□ -0.77
Smn1P97801 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smn1P97801 Gm8793-201ENSMUST00000183069 1303 ntBASIC10.26□□□□□ -0.77
Smn1P97801 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Smn1P97801 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Smn1P97801 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smn1P97801 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms