Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smarcc1P97496 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Smarcc1P97496 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smarcc1P97496 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
Smarcc1P97496 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smarcc1P97496 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Smarcc1P97496 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Smarcc1P97496 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Smarcc1P97496 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smarcc1P97496 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC15.02■□□□□ -0
Smarcc1P97496 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Smarcc1P97496 Gm12419-201ENSMUST00000116649 636 ntBASIC15.02■□□□□ -0
Smarcc1P97496 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC15.02■□□□□ -0
Smarcc1P97496 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC15.02■□□□□ -0
Smarcc1P97496 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC15.02■□□□□ -0
Smarcc1P97496 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC15.02■□□□□ -0
Smarcc1P97496 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC15.02■□□□□ -0
Smarcc1P97496 Gm5706-201ENSMUST00000181525 993 ntBASIC15.02■□□□□ -0
Smarcc1P97496 Gm9034-201ENSMUST00000182071 1005 ntBASIC15.02■□□□□ -0
Smarcc1P97496 Gm17798-201ENSMUST00000182282 1035 ntBASIC15.02■□□□□ -0
Smarcc1P97496 Mir6407-201ENSMUST00000184510 101 ntBASIC15.02■□□□□ -0
Smarcc1P97496 Gm4034-201ENSMUST00000187674 480 ntBASIC15.02■□□□□ -0
Smarcc1P97496 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC15.02■□□□□ -0
Smarcc1P97496 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC15.02■□□□□ -0
Smarcc1P97496 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC15.02■□□□□ -0
Smarcc1P97496 Gm8342-201ENSMUST00000209839 757 ntBASIC15.02■□□□□ -0
Smarcc1P97496 Gm35713-201ENSMUST00000210516 199 ntBASIC15.02■□□□□ -0
Smarcc1P97496 AC112945.1-201ENSMUST00000226413 514 ntBASIC15.02■□□□□ -0
Smarcc1P97496 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smarcc1P97496 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcc1P97496 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Smarcc1P97496 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcc1P97496 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcc1P97496 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcc1P97496 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcc1P97496 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcc1P97496 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcc1P97496 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Smarcc1P97496 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcc1P97496 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcc1P97496 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcc1P97496 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Smarcc1P97496 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcc1P97496 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcc1P97496 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcc1P97496 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcc1P97496 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcc1P97496 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC15.01□□□□□ -0.01
Smarcc1P97496 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcc1P97496 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcc1P97496 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcc1P97496 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcc1P97496 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcc1P97496 Gm25766-201ENSMUST00000104101 131 ntBASIC15.01□□□□□ -0.01
Smarcc1P97496 n-R5s84-201ENSMUST00000122591 109 ntBASIC15.01□□□□□ -0.01
Smarcc1P97496 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Smarcc1P97496 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC15.01□□□□□ -0.01
Smarcc1P97496 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcc1P97496 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcc1P97496 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC15.01□□□□□ -0.01
Smarcc1P97496 Gm37981-201ENSMUST00000194280 535 ntBASIC15.01□□□□□ -0.01
Smarcc1P97496 Gm38151-201ENSMUST00000195085 289 ntBASIC15.01□□□□□ -0.01
Smarcc1P97496 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC15.01□□□□□ -0.01
Smarcc1P97496 Gm3017-201ENSMUST00000203603 1126 ntBASIC15.01□□□□□ -0.01
Smarcc1P97496 Gm6108-201ENSMUST00000208365 367 ntBASIC15.01□□□□□ -0.01
Smarcc1P97496 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC15.01□□□□□ -0.01
Smarcc1P97496 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcc1P97496 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Smarcc1P97496 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcc1P97496 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcc1P97496 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcc1P97496 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcc1P97496 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcc1P97496 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC15.01□□□□□ -0.01
Smarcc1P97496 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcc1P97496 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC15□□□□□ -0.01
Smarcc1P97496 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcc1P97496 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Smarcc1P97496 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcc1P97496 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Smarcc1P97496 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcc1P97496 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smarcc1P97496 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Smarcc1P97496 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcc1P97496 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcc1P97496 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC15□□□□□ -0.01
Smarcc1P97496 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC15□□□□□ -0.01
Smarcc1P97496 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC15□□□□□ -0.01
Smarcc1P97496 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smarcc1P97496 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smarcc1P97496 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smarcc1P97496 Gm20392-201ENSMUST00000173047 701 ntBASIC15□□□□□ -0.01
Smarcc1P97496 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smarcc1P97496 Gm5621-201ENSMUST00000187303 640 ntBASIC15□□□□□ -0.01
Smarcc1P97496 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smarcc1P97496 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smarcc1P97496 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC15□□□□□ -0.01
Smarcc1P97496 Gm44315-201ENSMUST00000203041 219 ntBASIC15□□□□□ -0.01
Smarcc1P97496 Gm45113-201ENSMUST00000207518 165 ntBASIC15□□□□□ -0.01
Smarcc1P97496 Gm17931-201ENSMUST00000208132 634 ntBASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms